RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HIST1H2AGP0C0S8 130 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 HIST1H2ADP20671 130 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PCSK1P29120 753 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CASP1P29466 404 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 NR1H2P55055 460 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 AARS2Q5JTZ9 985 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KYAT3Q6YP21 454 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 NEK10Q6ZWH5 1172 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 C4orf33Q8N1A6 199 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KYQ8NBH2 561 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PPHLN1Q8NEY8 458 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 HIST1H2AHQ96KK5 128 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CRAMP1Q96RY5 1269 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 HIST1H2AJQ99878 128 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SH3GL2Q99962 352 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 H2AFJQ9BTM1 129 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MRPS26Q9BYN8 205 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TMEM245Q9H330 911 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SYTL2Q9HCH5 934 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 NPHS2Q9NP85 383 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 DMAP1Q9NPF5 467 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 GDF3Q9NR23 364 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 USE1Q9NZ43 259 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ARHGAP20Q9P2F6 1191 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ZBTB12Q9Y330 459 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SPATA31A3Q5VYP0 1347 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SPDYE2BA6NHP3 402 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 M0QYV0 167 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TRDMT1O14717 391 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 AKAP10O43572 662 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SOAT2O75908 522 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 GH2P01242 217 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ENO1P06733 434 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 APRTP07741 180 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SPDYE6P0CI01 402 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PYGMP11217 842 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ANXA11P50995 505 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KCNK10P57789 538 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PTK2BQ14289 1009 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TMC3Q7Z5M5 1100 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SPATA18Q8TC71 538 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ATP8B4Q8TF62 1192 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SEPT1Q8WYJ6 367 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MIEF2Q96C03 454 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 GPRASP2Q96D09 838 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TEX13BQ9BXU2 312 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF556Q9HAH1 456 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ATAD3AQ9NVI7 634 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 NMRK1Q9NWW6 199 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TMCO1Q9UM00 188 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ATP6V1G2O95670 118 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 IFNA14P01570 189 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CD4P01730 458 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 RALBP11234 206 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CACNA2D1P54289 1103 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PPARDQ03181 441 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MGAT5Q09328 741 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 USP10Q14694 798 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 AGAP9Q5VTM2 703 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 IER5Q5VY09 327 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 DSTYKQ6XUX3 929 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC25A23Q9BV35 468 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 CDC42EP4Q9H3Q1 356 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MLXIPLQ9NP71 852 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KDM6AO15550 1401 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 RNF17Q9BXT8 1623 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SDR42E2A6NKP2 422 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 UNC5CO95185 931 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 BNC1Q01954 994 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PPIDQ08752 370 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MRPL28Q13084 256 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 NTRK3Q16288 839 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 LONRF1Q17RB8 773 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 EAPPQ56P03 285 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ZC3H12BQ5HYM0 836 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ERMARDQ5T6L9 678 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 DPY19L2Q6NUT2 758 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SPIRE2Q8WWL2 714 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 SNX19Q92543 992 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 MASTLQ96GX5 879 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 KLHL4Q9C0H6 718 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PALMDQ9NP74 551 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 AGPAT3Q9NRZ7 376 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 UTP6Q9NYH9 597 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 PCSK1NQ9UHG2 260 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ACOT9Q9Y305 439 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 TSC22D4Q9Y3Q8 395 aa6.41□□□□□ -1.38
PRPF4B-205ENST00000480058 ENO3P13929 434 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ADSLP30566 484 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 SFSWAPQ12872 951 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 XRCC4Q13426 336 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 NCOA4Q13772 614 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 KRT72Q14CN4 511 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 MAPRE1Q15691 268 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 WDR72Q3MJ13 1102 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 TTLL9Q3SXZ7 439 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms