RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RIPOR3Q96MK2 946 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 MAGEC2Q9UBF1 373 aaPredicted RBP28.68■■■□□ 2.18
CCM2-211ENST00000478582 CDH22Q9UJ99 828 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 FBXW11Q9UKB1 542 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 MAFFQ9ULX9 164 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 WDR27A2RRH5 827 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 DCXO43602 365 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 AFPP02771 609 aaKnown RBP28.67■■■□□ 2.18
CCM2-211ENST00000478582 GPR17Q13304 367 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 ATAT1Q5SQI0 421 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 CDKAL1Q5VV42 579 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 ELMSAN1Q6PJG2 1045 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 OSTM1Q86WC4 334 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 KREMEN2Q8NCW0 462 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 OR10T2Q8NGX3 314 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 ACBD6Q9BR61 282 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 PI4K2AQ9BTU6 479 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 ZCWPW1Q9H0M4 648 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 SFXN1Q9H9B4 322 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 APOBEC3GQ9HC16 384 aaKnown RBP28.67■■■□□ 2.18
CCM2-211ENST00000478582 DDX43Q9NXZ2 648 aaKnown RBP28.67■■■□□ 2.18
CCM2-211ENST00000478582 POLIQ9UNA4 740 aa28.67■■■□□ 2.18
CCM2-211ENST00000478582 SPDYE4A6NLX3 237 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 LRRN2O75325 713 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 EEF1GP26641 437 aaKnown RBP28.66■■■□□ 2.18
CCM2-211ENST00000478582 MTIF2P46199 727 aaKnown RBP28.66■■■□□ 2.18
CCM2-211ENST00000478582 NOP14P78316 857 aaKnown RBP28.66■■■□□ 2.18
CCM2-211ENST00000478582 MYL7Q01449 175 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 CETN1Q12798 172 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 SPOPLQ6IQ16 392 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 RTL10Q7L3V2 364 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 CREBRFQ8IUR6 639 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 MAN1C1Q9NR34 630 aa28.66■■■□□ 2.18
CCM2-211ENST00000478582 GPR37L1O60883 481 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 PAPLNO95428 1278 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 ATF2P15336 505 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 ARPP19P56211 112 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 NCAPHQ15003 741 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 TCP11X2Q5H9J9 407 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 TMC5Q6UXY8 1006 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 ELMO3Q96BJ8 720 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 TMEM209Q96SK2 561 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 MRPL45Q9BRJ2 306 aaKnown RBP28.65■■■□□ 2.18
CCM2-211ENST00000478582 BCO2Q9BYV7 579 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 POMKQ9H5K3 350 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 FANCLQ9NW38 375 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 AFF4Q9UHB7 1163 aaKnown RBP28.65■■■□□ 2.18
CCM2-211ENST00000478582 PLXNA3P51805 1871 aa28.65■■■□□ 2.18
CCM2-211ENST00000478582 KCNJ18B7U540 433 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 WEE2P0C1S8 567 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 SPATA31D3P0C874 917 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 CPB1P15086 417 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 PCSK1P29120 753 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 ASPAP45381 313 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 KCNJ12Q14500 433 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 MAN2A1Q16706 1144 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 UVSSAQ2YD98 709 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 WDR44Q5JSH3 913 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 TMEM31Q5JXX7 168 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 SPATA31D4Q6ZUB0 917 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 GPR149Q86SP6 731 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 NIF3L1Q9GZT8 377 aa28.64■■■□□ 2.18
CCM2-211ENST00000478582 OR4Q2P0C623 313 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 GNL1P36915 607 aaPredicted RBP28.63■■■□□ 2.17
CCM2-211ENST00000478582 SMARCB1Q12824 385 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 RNF19BQ6ZMZ0 732 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 TCEAL8Q8IYN2 117 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 DCP1BQ8IZD4 617 aaKnown RBP28.63■■■□□ 2.17
CCM2-211ENST00000478582 LMO3Q8TAP4 145 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 TUBGCP2Q9BSJ2 902 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 SNX25Q9H3E2 840 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 SMYD3Q9H7B4 428 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 CYP3A43Q9HB55 503 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 C11orf16Q9NQ32 467 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 MUTYHQ9UIF7 546 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 NR2E1Q9Y466 385 aa28.63■■■□□ 2.17
CCM2-211ENST00000478582 MTCL1Q9Y4B5 1905 aaKnown RBP28.63■■■□□ 2.17
CCM2-211ENST00000478582 CLSTN1O94985 981 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 CAVIN2O95810 425 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 PRKCSHP14314 528 aaPredicted RBP28.62■■■□□ 2.17
CCM2-211ENST00000478582 LMO2P25791 158 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 ZNF165P49910 485 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 CDH8P55286 799 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 TSPY1Q01534 308 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 HSP90AA4PQ58FG1 418 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 LRRTM3Q86VH5 581 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 EHBP1Q8NDI1 1231 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 CMASQ8NFW8 434 aaPredicted RBP28.62■■■□□ 2.17
CCM2-211ENST00000478582 PKMYT1Q99640 499 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 LRFN3Q9BTN0 628 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 SDCBP2Q9H190 292 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 ZDHHC7Q9NXF8 308 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 CDH9Q9ULB4 789 aa28.62■■■□□ 2.17
CCM2-211ENST00000478582 SMTNL1A8MU46 457 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 ZMYND10O75800 440 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 INTS6LQ5JSJ4 861 aaKnown RBP28.61■■■□□ 2.17
CCM2-211ENST00000478582 LIN9Q5TKA1 542 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 CCDC149Q6ZUS6 474 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 AOPEPQ8N6M6 819 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 OR6B3Q8NGW1 331 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms