RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DYRK1AQ13627 763 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 RAB32Q13637 225 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 CYP2A13Q16696 494 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 TEDDM1Q5T9Z0 273 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 LMBRD2Q68DH5 695 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 SFRP4Q6FHJ7 346 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 CCDC149Q6ZUS6 474 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 MICALCLQ6ZW33 695 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PPP1R32Q7Z5V6 425 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 USP37Q86T82 979 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 VRK3Q8IV63 474 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 LCORLQ8N3X6 602 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PPP1R35Q8TAP8 253 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 POC1BQ8TC44 478 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 LRTOMTQ8WZ04 291 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 SNX19Q92543 992 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 OSBPL9Q96SU4 736 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 NELL2Q99435 816 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 HEPHQ9BQS7 1158 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 ZSWIM1Q9BR11 485 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 LRFN3Q9BTN0 628 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 TLR10Q9BXR5 811 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 BTBD1Q9H0C5 482 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF768Q9H5H4 540 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 RGS17Q9UGC6 210 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 USP25Q9UHP3 1055 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 TPCN1Q9ULQ1 816 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PCDHA6Q9UN73 950 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CENPVL1A0A0U1RR11 272 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CFAP69A5D8W1 941 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 TPP1O14773 563 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 PRSS23O95084 383 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 AHSGP02765 367 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 ELANEP08246 267 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 SRGNP10124 158 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CDK4P11802 303 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 RHCEP18577 417 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 LOXL3P58215 753 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 RHDQ02161 417 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 FPGSQ05932 587 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 EXOSC9Q06265 439 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CNN3Q15417 329 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 NBPF8Q3BBV2 869 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 LAYNQ6UX15 382 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 C14orf80Q86SX3 495 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 LNX2Q8N448 690 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 PLBD2Q8NHP8 589 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 FBXO41Q8TF61 875 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 ANKS1AQ92625 1134 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 ZC3H10Q96K80 434 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 MRGPRX1Q96LB2 322 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 ADAM2Q99965 735 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 TRIM54Q9BYV2 358 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 DPH1Q9BZG8 443 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 NUP62CLQ9H1M0 184 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 SERHL2Q9H4I8 314 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 ARMT1Q9H993 441 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CTTNBP2NLQ9P2B4 639 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 HSFX1Q9UBD0 423 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 TESQ9UGI8 421 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 SHOC2Q9UQ13 582 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 RAD54BQ9Y620 910 aa4.09□□□□□ -1.75
ECHDC1-213ENST00000474240 CCDC151A5D8V7 595 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 PRSS29PA6NIE9 313 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ZAR1LA6NP61 321 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 M0QYG6 137 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 PRC1O43663 620 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 SUN1O94901 812 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 SPDEFO95238 335 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 GRPP07492 148 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 EGR2P11161 476 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 PHKG2P15735 406 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 CD38P28907 300 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 SLC7A1P30825 629 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ARFIP2P53365 341 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ITIH3Q06033 890 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 GRM3Q14832 879 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 IQCB1Q15051 598 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 KIAA0753Q2KHM9 967 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 LONRF3Q496Y0 759 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 RNF220Q5VTB9 566 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 AATKQ6ZMQ8 1374 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 Q8NA96 180 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 PSD4Q8NDX1 1056 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 IL31RAQ8NI17 732 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 IPCEF1Q8WWN9 437 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 APIPQ96GX9 242 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 SPATA5L1Q9BVQ7 753 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 TEX101Q9BY14 249 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ZNF518BQ9C0D4 1074 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 UNKLQ9H9P5 680 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ZMAT3Q9HA38 289 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 DDX21Q9NR30 783 aaKnown RBP eCLIP4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ZSCAN32Q9NX65 697 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 ETAA1Q9NY74 926 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 HESX1Q9UBX0 185 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 CPA4Q9UI42 421 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 SLC45A2Q9UMX9 530 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms