RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 PRAMEF12O95522 483 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 RETP07949 1114 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 ATF6P18850 670 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 TGM1P22735 817 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 CYP4F8P98187 520 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 POU5F1Q01860 360 aaKnown RBP15.34■□□□□ 0.05
ATG4B-214ENST00000465399 GRIN1Q05586 938 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 SF3A1Q15459 793 aaKnown RBP15.34■□□□□ 0.05
ATG4B-214ENST00000465399 SV2CQ496J9 727 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 TXNDC11Q6PKC3 985 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 Q6ZS52 159 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-214ENST00000465399 LONP2Q86WA8 852 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 HVCN1Q96D96 273 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 LRRC3BQ96PB8 259 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 PARD6AQ9NPB6 346 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-214ENST00000465399 STYXL1Q9Y6J8 313 aa15.34■□□□□ 0.05
ATG4B-214ENST00000465399 ATG2BQ96BY7 2078 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 CHURC1-FNTBB4DL54 471 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 IL18RAPO95256 599 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 DDIT3P35638 169 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 FNTBP49356 437 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 CDR1P51861 262 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 CCINQ13939 588 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 PON2Q15165 354 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 PTPAQ15257 358 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 NT5DC4Q86YG4 428 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 DCP1BQ8IZD4 617 aaKnown RBP15.33■□□□□ 0.04
ATG4B-214ENST00000465399 SYNPOQ8N3V7 929 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 GIPC2Q8TF65 315 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 ZNF560Q96MR9 790 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 IL21Q9HBE4 155 aa15.33■□□□□ 0.04
ATG4B-214ENST00000465399 KPNA7A9QM74 516 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 K7ESF4 209 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 HAPLN1P10915 354 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-214ENST00000465399 AVPR1AP37288 418 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 PNPLA4P41247 253 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 TNK2Q07912 1038 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 DMWDQ09019 674 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 POSTNQ15063 836 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 ITPRIPL2Q3MIP1 535 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
ATG4B-214ENST00000465399 DYMQ7RTS9 669 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 SFR1Q86XK3 245 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 CMTM8Q8IZV2 173 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 SEL1LQ9UBV2 794 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 CCDC39Q9UFE4 941 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 EXOC7Q9UPT5 735 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 PCDHB5Q9Y5E4 795 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 SPTBN2O15020 2390 aa15.32■□□□□ 0.04
ATG4B-214ENST00000465399 HELZP42694 1942 aaKnown RBP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 EML5Q05BV3 1969 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 HRO43593 1189 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 TXLNAP40222 546 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 TSPY1Q01534 308 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 CEP68Q76N32 757 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 LRRTM3Q86VH5 581 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 EFCAB13Q8IY85 973 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 NETO1Q8TDF5 533 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 SLC46A2Q9BY10 475 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 SMG9Q9H0W8 520 aaKnown RBP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 SEMA4GQ9NTN9 838 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.31■□□□□ 0.04
ATG4B-214ENST00000465399 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
ATG4B-214ENST00000465399 DCDC2BA2VCK2 349 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 FOXD2O60548 495 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 PPP1R37O75864 691 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 GAP43P17677 238 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 HOXA6P31267 233 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 NLRP12P59046 1061 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 BFSP1Q12934 665 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 CSRP2Q16527 193 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 CRELD2Q6UXH1 353 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-214ENST00000465399 PRR23CQ6ZRP0 262 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 KIAA1549LQ6ZVL6 1849 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 GKN1Q9NS71 199 aa15.3■□□□□ 0.04
ATG4B-214ENST00000465399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 ATG13O75143 517 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 GCNT3O95395 438 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms