RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 OSTM1Q86WC4 334 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 ELMOD1Q8N336 334 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 KBTBD7Q8WVZ9 684 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 RPGRIP1Q96KN7 1286 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 NECAB3Q96P71 396 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 ACBD6Q9BR61 282 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 MRPL45Q9BRJ2 306 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 PI4K2AQ9BTU6 479 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 POMKQ9H5K3 350 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 SLC27A5Q9Y2P5 690 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 MYH10P35580 1976 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 A8MXQ7 604 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 GABRDO14764 452 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 HCRTO43612 131 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 TACC1O75410 805 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 PDGFRBP09619 1106 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 TWF1Q12792 350 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CETN1Q12798 172 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 PLD1Q13393 1074 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 NFE2Q16621 373 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 STX1AQ16623 288 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 GRASPQ7Z6J2 395 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 ATAD1Q8NBU5 361 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 SYT15Q9BQS2 421 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 YIPF1Q9Y548 306 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 CLUHO75153 1309 aa12.87□□□□□ -0.35
RPUSD3-211ENST00000464783 PTPRDP23468 1912 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 LMO2P25791 158 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 FMO5P49326 533 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 TUFMP49411 452 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 EPHB3P54753 998 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 CDH8P55286 799 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 ZP2Q05996 745 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 IQCEQ6IPM2 695 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 LIMS2Q7Z4I7 341 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 TDRD5Q8NAT2 981 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 RHOBTB2Q9BYZ6 727 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 TMEM63CQ9P1W3 806 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 GTF3C4Q9UKN8 822 aa12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPUSD3-211ENST00000464783 ATP2C2O75185 946 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 SOAT2O75908 522 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 VNN2O95498 520 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 PTPN2P17706 415 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 MARSP56192 900 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 MCCD1P59942 119 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 VEPH1Q14D04 833 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 PABPC1LQ4VXU2 614 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms