RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF395Q9H8N7 513 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SAR1AQ9NR31 198 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SCOCQ9UIL1 159 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 LRCH1Q9Y2L9 728 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 KRT1P04264 644 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 BGNP21810 368 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 GEMIN4P57678 1058 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 CYP24A1Q07973 514 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 CCDC142Q17RM4 750 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 PCDHB2Q9Y5E7 798 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 CYP1A1P04798 512 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 CENPUQ71F23 418 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 RHPN2Q8IUC4 686 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 SP8Q8IXZ3 490 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 PYROXD1Q8WU10 500 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 TTC25Q96NG3 672 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 FAM111AQ96PZ2 611 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 TSSK1BQ9BXA7 367 aa13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-204ENST00000464764 PMM2O15305 246 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ESRRAP11474 423 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SLC18A1P54219 525 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ARL4CP56559 192 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 LDHDQ86WU2 507 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 TRIM55Q9BYV6 548 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 VCXQ9H320 206 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 C1orf112Q9NSG2 853 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 NFIBO00712 420 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 LMNAP02545 664 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 MYL2P10916 166 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SKIP12755 728 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 OGDHQ02218 1023 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 HIF1AQ16665 826 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 BBS9Q3SYG4 887 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 CMPK2Q5EBM0 449 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 EFHC2Q5JST6 749 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SLC25A41Q8N5S1 370 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 RIT2Q99578 217 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 PCMTD2Q9NV79 361 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 USP1O94782 785 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 TJP3O95049 919 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ZWINTO95229 277 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SERPINB4P48594 390 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ACOT2P49753 483 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 NCKAP1LP55160 1127 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 NOMO3P69849 1222 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 PTP4A2Q12974 167 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 MTMR2Q13614 643 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 BANPQ8N9N5 519 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 FBXO36Q8NEA4 188 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 STMN2Q93045 179 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 SERAC1Q96JX3 654 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 FGD4Q96M96 766 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 MFSD14AQ96MC6 490 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 FAM161BQ96MY7 647 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 CYTH2Q99418 400 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 APOBEC3GQ9HC16 384 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 TELO2Q9Y4R8 837 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
CLCNKA-204ENST00000464764 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 HNRNPDLO14979 420 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 DLDP09622 509 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 TNNI1P19237 187 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 PGM1P36871 562 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 RPS6KA3P51812 740 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 OCRLQ01968 901 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 GCNT1Q02742 428 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 MORF4L2Q15014 288 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 BRDTQ58F21 947 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 LIN9Q5TKA1 542 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 MZB1Q8WU39 189 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 GATA6Q92908 595 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 MECRQ9BV79 373 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 SYNCQ9H7C4 482 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms