RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 VIPR2P41587 438 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 NPTX2P47972 431 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 PURAQ00577 322 aaKnown RBP7.42□□□□□ -1.22
PTCD3-205ENST00000464541 MC2RQ01718 297 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 CYB5RLQ6IPT4 315 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 TAF2Q6P1X5 1199 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 ZNF783Q6ZMS7 281 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 VRK3Q8IV63 474 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 CELF5Q8N6W0 485 aaKnown RBP7.42□□□□□ -1.22
PTCD3-205ENST00000464541 OR6B3Q8NGW1 331 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 SPATA5L1Q9BVQ7 753 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 CASS4Q9NQ75 786 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-205ENST00000464541 HESX1Q9UBX0 185 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 PACSIN3Q9UKS6 424 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 RAD54BQ9Y620 910 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
PTCD3-205ENST00000464541 CFAP69A5D8W1 941 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 PROM1O43490 865 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 TRIAP1O43715 76 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 ATXN1LP0C7T5 689 aaKnown RBP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 CYP2C9P11712 490 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 XRCC6P12956 609 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 RHCEP18577 417 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 NDUFV1P49821 464 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 WNT3P56703 355 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 TGFB2P61812 414 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 RHDQ02161 417 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 POLD3Q15054 466 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 CD300EQ496F6 205 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 RNF220Q5VTB9 566 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 PPP4R4Q6NUP7 873 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 SWSAP1Q6NVH7 229 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 CCDC149Q6ZUS6 474 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 FAM9AQ8IZU1 332 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 PCSK9Q8NBP7 692 aaKnown RBP7.41□□□□□ -1.22
PTCD3-205ENST00000464541 FAM46DQ8NEK8 389 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 SSH3Q8TE77 659 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 LRTOMTQ8WZ04 291 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 Q96MF0 132 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 KCTD5Q9NXV2 234 aa7.41□□□□□ -1.22
PTCD3-205ENST00000464541 A0A0B4J269 797 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 MGEA5O60502 916 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 RAMP2O60895 175 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 ESRRBO95718 433 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 GCP02774 474 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 SLPIP03973 132 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 RPL17P18621 184 aaKnown RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 SLC7A1P30825 629 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 TOB1P50616 345 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 MPP3Q13368 585 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 TUBB3Q13509 450 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 LONRF3Q496Y0 759 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 HECTD2Q5U5R9 776 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 LMBRD2Q68DH5 695 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 APOA5Q6Q788 366 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 SLC30A10Q6XR72 485 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 FAM156AQ8NDB6 213 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 NELL2Q99435 816 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 LRRC27Q9C0I9 530 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 TMX2Q9Y320 296 aa7.4□□□□□ -1.22
PTCD3-205ENST00000464541 WDR33Q9C0J8 1336 aaKnown RBP7.4□□□□□ -1.22
PTCD3-205ENST00000464541 A0A087WWL8 130 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 MYO1CO00159 1063 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 BTN3A1O00481 513 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 KITP10721 976 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 GATA3P23771 443 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 SEC24CP53992 1094 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 SATB1Q01826 763 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 ITIH3Q06033 890 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 IQCB1Q15051 598 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 KIAA0753Q2KHM9 967 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 SLC44A4Q53GD3 710 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 SFRP4Q6FHJ7 346 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-205ENST00000464541 VWA1Q6PCB0 445 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 Q6ZNX1 250 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 CAVIN3Q969G5 261 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 TTPALQ9BTX7 342 aa7.39□□□□□ -1.23
PTCD3-205ENST00000464541 DDX21Q9NR30 783 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTCD3-205ENST00000464541 MRPS18AQ9NVS2 196 aaKnown RBP7.39□□□□□ -1.23
PTCD3-205ENST00000464541 ING1Q9UK53 422 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-205ENST00000464541 EPN1Q9Y6I3 576 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-205ENST00000464541 F5H697 171 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 TBC1D4O60343 1298 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 VPS4BO75351 444 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 SLC11A2P49281 568 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 LOXL3P58215 753 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 NXPH1P58417 271 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 RAB32Q13637 225 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 SF3B3Q15393 1217 aaKnown RBP7.38□□□□□ -1.23
PTCD3-205ENST00000464541 NBPF8Q3BBV2 869 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 CCDC181Q5TID7 509 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 BEND2Q8NDZ0 799 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 APIPQ96GX9 242 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 PGBD1Q96JS3 809 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 SLC46A1Q96NT5 459 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms