RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 ZACNQ401N2 412 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
RBM39-223ENST00000463004 LRRC52Q8N7C0 313 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 FKTNO75072 461 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 SEC31AO94979 1220 aaKnown RBP12.36□□□□□ -0.43
RBM39-223ENST00000463004 SMIM10L2AP0DMW4 78 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 SMIM10L2BP0DMW5 78 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
RBM39-223ENST00000463004 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
RBM39-223ENST00000463004 GPS1Q13098 491 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 TEPSINQ96N21 525 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
RBM39-223ENST00000463004 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 PLAAQ9Y263 795 aa12.36□□□□□ -0.43
RBM39-223ENST00000463004 ANKRD63C9JTQ0 380 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ERBB2P04626 1255 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 MMEP08473 750 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 PBX1P40424 430 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 OR1G1P47890 313 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 RAD51Q06609 339 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 CCDC6Q16204 474 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 MEI1Q5TIA1 1274 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 WDR93Q6P2C0 686 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 LBHD1Q9BQE6 289 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 GANQ9H2C0 597 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 TTI1O43156 1089 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 GMNNO75496 209 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 B3GAT3O94766 335 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 RECQLP46063 649 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ATP11AP98196 1134 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ZNF280DQ6N043 979 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 SHC3Q92529 594 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 DPP7Q9UHL4 492 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 FAM170AA1A519 330 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 CAPN15O75808 1086 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ARL2P36404 184 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 CASP5P51878 434 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 EPM2AIP1Q7L775 607 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 RIBC1Q8N443 379 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ZNF606Q8WXB4 792 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 CYFIP2Q96F07 1278 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 ERP44Q9BS26 406 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ROPN1BQ9BZX4 212 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 ROPN1Q9HAT0 212 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 CREB3O43889 395 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 NNMTP40261 264 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 SIAH1Q8IUQ4 282 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 KIRREL3Q8IZU9 778 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 EIF1ADQ8N9N8 165 aaKnown RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
RBM39-223ENST00000463004 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
RBM39-223ENST00000463004 A0A0B4J269 797 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 ARSEP51690 589 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 EPHB1P54762 984 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 NME3Q13232 169 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 BCAS4Q8TDM0 211 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 SP110Q9HB58 689 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 AMACRQ9UHK6 382 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 FZD1Q9UP38 647 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 LACTBL1A8MY62 500 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 B4GALT4O60513 344 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 S100BP04271 92 aaPredicted RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 CCT5P48643 541 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 RGS7P49802 495 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 TRIP13Q15645 432 aaPredicted RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 MOB2Q70IA6 237 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 COL20A1Q9P218 1284 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 TPX2Q9ULW0 747 aaKnown RBP12.34□□□□□ -0.43
RBM39-223ENST00000463004 ZBTB39O15060 712 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 CYBBP04839 570 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 TMED2Q15363 201 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 ECM1Q16610 540 aa12.34□□□□□ -0.43
RBM39-223ENST00000463004 HIF1AQ16665 826 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms