RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.39
CPNE6-202ENST00000460657 OTUD4Q01804 1114 aaKnown RBP12.65□□□□□ -0.39
CPNE6-202ENST00000460657 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.39
CPNE6-202ENST00000460657 TTC16Q8NEE8 873 aa12.65□□□□□ -0.39
CPNE6-202ENST00000460657 ACAP3Q96P50 834 aa12.65□□□□□ -0.39
CPNE6-202ENST00000460657 FRMD8Q9BZ67 464 aaPredicted RBP12.65□□□□□ -0.39
CPNE6-202ENST00000460657 ERVK-5Q9HDB9 667 aa12.65□□□□□ -0.39
CPNE6-202ENST00000460657 MAGED2Q9UNF1 606 aaPredicted RBP12.65□□□□□ -0.39
CPNE6-202ENST00000460657 SHOC2Q9UQ13 582 aa12.65□□□□□ -0.39
CPNE6-202ENST00000460657 IGLV3-22A0A075B6J6 115 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PIK3R2O00459 728 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 GIPC1O14908 333 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 DPEP1P16444 411 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 GPD1P21695 349 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 VCPP55072 806 aaKnown RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 MMP19Q99542 508 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 VPS11Q9H270 941 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PCDH9Q9HC56 1237 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 SIX2Q9NPC8 291 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 CISHQ9NSE2 258 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 MYH6P13533 1939 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 ATP6V1G2O95670 118 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PDHA1P08559 390 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 SNRPAP09012 282 aaKnown RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PGM1P36871 562 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 CNGA2Q16280 664 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 KATNAL2Q8IYT4 538 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 A8MXQ7 604 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 GPC4O75487 556 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 TMEM132DQ14C87 1099 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 ARL13BQ3SXY8 428 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 RNF169Q8NCN4 708 aa12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PRPF31Q8WWY3 499 aaKnown RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 PRMT7Q9NVM4 692 aaPredicted RBP12.64□□□□□ -0.39
CPNE6-202ENST00000460657 FSCN2O14926 492 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 TARSP26639 723 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 RGS7P49802 495 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 GMPSP49915 693 aaPredicted RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 PPATQ06203 517 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 ANGEL2Q5VTE6 544 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 TRIM4Q9C037 500 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 HACL1Q9UJ83 578 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 LAMA4Q16363 1823 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 VWA5AO00534 786 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 PLA2G6O60733 806 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 LYPLA2O95372 231 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 MYL6P60660 151 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 CAPRIN2Q6IMN6 1127 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 NLRP9Q7RTR0 991 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 CEP120Q8N960 986 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 FBXO36Q8NEA4 188 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 ZKSCAN4Q969J2 545 aaPredicted RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 SERPINI1Q99574 410 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 KIF1CO43896 1103 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 HUS1O60921 280 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 MMP13P45452 471 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 SERPINB9P50453 376 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 KPNA2P52292 529 aaKnown RBP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 NCKAP1LP55160 1127 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 CXCL9Q07325 125 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 PRAMEF18Q5VWM3 479 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 KPNA7A9QM74 516 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 SNX3O60493 162 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 GMNNO75496 209 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 MAP7Q14244 749 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 MMEL1Q495T6 779 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 MFSD7Q6UXD7 560 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 PCDHB18PQ96TA0 734 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE6-202ENST00000460657 COG5Q9UP83 839 aa12.63□□□□□ -0.39
CPNE6-202ENST00000460657 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 GRAP2O75791 330 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 PECAM1P16284 738 aaPredicted RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 ADORA2BP29275 332 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 AP2B1P63010 937 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
CPNE6-202ENST00000460657 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
CPNE6-202ENST00000460657 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms