RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 AGAP2Q99490 1192 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 B3GNT5Q9BYG0 378 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 SLITRK6Q9H5Y7 841 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 FAM204AQ9H8W3 233 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 MRPS18AQ9NVS2 196 aaKnown RBP3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 HESX1Q9UBX0 185 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 MED16Q9Y2X0 877 aa3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCARNA18-201ENST00000459004 FAM227AF5H4B4 570 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 YY2O15391 372 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 MPPED1O15442 326 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 LMNAP02545 664 aaKnown RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 PIM1P11309 404 aaPredicted RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 NPR1P16066 1061 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 PPP3CBP16298 524 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 GCLCP48506 637 aaPredicted RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 NDUFV1P49821 464 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 NXPH1P58417 271 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 PTPRRQ15256 657 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 C14orf80Q86SX3 495 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 FMNL3Q8IVF7 1028 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 CELF5Q8N6W0 485 aaKnown RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 PCSK9Q8NBP7 692 aaKnown RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 SLC30A5Q8TAD4 765 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 KBTBD7Q8WVZ9 684 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 LPIN2Q92539 896 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 NT5C1BQ96P26 610 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 MOGAT1Q96PD6 335 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 SPATA5L1Q9BVQ7 753 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 AMBRA1Q9C0C7 1298 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 SMOC2Q9H3U7 446 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 ZMAT3Q9HA38 289 aaKnown RBP3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 LRIT1Q9P2V4 623 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 L1RE1Q9UN81 338 aa3.78□□□□□ -1.8
SCARNA18-201ENST00000459004 SALL3Q9BXA9 1300 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 GRPP07492 148 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 ATXN1LP0C7T5 689 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 KITP10721 976 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CHRM3P20309 590 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CXCR5P32302 372 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CACNB3P54284 484 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 MRPS35P82673 323 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 COL10A1Q03692 680 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 ITIH3Q06033 890 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 BOP1Q14137 746 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 GBX1Q14549 363 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 ZNF169Q14929 603 aaPredicted RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 IQCB1Q15051 598 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 LLGL1Q15334 1064 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CNN3Q15417 329 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 NBPF8Q3BBV2 869 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 LONRF3Q496Y0 759 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 KIAA0895LQ68EN5 471 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 SFRP4Q6FHJ7 346 aaPredicted RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 OLFML1Q6UWY5 402 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 LAYNQ6UX15 382 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 TSHZ1Q6ZSZ6 1077 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CHST15Q7LFX5 561 aaPredicted RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 SRGAP1Q7Z6B7 1085 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 WDR75Q8IWA0 830 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 B3GALNT2Q8NCR0 500 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 TOR1AIP2Q8NFQ8 470 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 OR6B3Q8NGW1 331 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 IL31RAQ8NI17 732 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 CAGE1Q8TC20 777 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 FBXO41Q8TF61 875 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 SLC46A1Q96NT5 459 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 NELL2Q99435 816 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 P2RX7Q99572 595 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 TRIM54Q9BYV2 358 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 ATP6V0A4Q9HBG4 840 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 PRDM11Q9NQV5 511 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 OBP2AQ9NY56 170 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 XPR1Q9UBH6 696 aa3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 DDX20Q9UHI6 824 aaKnown RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.77□□□□□ -1.81
SCARNA18-201ENST00000459004 FRMPD2Q68DX3 1309 aaPredicted RBP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 CCDC151A5D8V7 595 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 CFAP69A5D8W1 941 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 VSTM5A8MXK1 200 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 MYO1CO00159 1063 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 BTN3A1O00481 513 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 DCLK1O15075 740 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 TBC1D4O60343 1298 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ZBED1O96006 694 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 HRGP04196 525 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 CYP2C9P11712 490 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 XRCC6P12956 609 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 TYRP1P17643 537 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ATF3P18847 181 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 CD6P30203 668 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 PLA2G5P39877 138 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 VIPR2P41587 438 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 RARRES1P49788 294 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 HNRNPMP52272 730 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ARFIP2P53365 341 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 INHBEP58166 350 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 PRR16Q569H4 304 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms