RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 SHC4Q6S5L8 630 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 FOXD4L3Q6VB84 417 aaPredicted RBP23.44■■□□□ 1.34
SEC22C-213ENST00000456222 NT5DC4Q86YG4 428 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 THEM5Q8N1Q8 247 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 PDCL2Q8N4E4 241 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 NELL2Q99435 816 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 GPR88Q9GZN0 384 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 KBTBD4Q9NVX7 518 aa23.44■■□□□ 1.34
SEC22C-213ENST00000456222 ABI2Q9NYB9 513 aaPredicted RBP23.44■■□□□ 1.34
SEC22C-213ENST00000456222 DNAH14Q0VDD8 3507 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 HCRTO43612 131 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 EXTL3O43909 919 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 HAPLN1P10915 354 aaPredicted RBP23.43■■□□□ 1.34
SEC22C-213ENST00000456222 RPS9P46781 194 aaKnown RBP23.43■■□□□ 1.34
SEC22C-213ENST00000456222 SOX9P48436 509 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 GPR15P49685 360 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 MTAPQ13126 283 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 ALCAMQ13740 583 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 CCDC65Q8IXS2 484 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 FAM200AQ8TCP9 573 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 DHX58Q96C10 678 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 ZFYVE19Q96K21 471 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 ZNF560Q96MR9 790 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 TRIM9Q9C026 710 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 MTMR12Q9C0I1 747 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 SEMA4AQ9H3S1 761 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 FBXO4Q9UKT5 387 aa23.43■■□□□ 1.34
SEC22C-213ENST00000456222 ZNF638Q14966 1978 aaKnown RBP23.42■■□□□ 1.34
SEC22C-213ENST00000456222 PPP6R2O75170 966 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 ACAT1P24752 427 aaKnown RBP23.42■■□□□ 1.34
SEC22C-213ENST00000456222 TUFMP49411 452 aaKnown RBP23.42■■□□□ 1.34
SEC22C-213ENST00000456222 FCHO2Q0JRZ9 810 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 WDR44Q5JSH3 913 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 TMEM150AQ86TG1 271 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 ITIH5Q86UX2 942 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 OSTM1Q86WC4 334 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 CSGALNACT2Q8N6G5 542 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 OR5B17Q8NGF7 314 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 FAM3CQ92520 227 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 SNX21Q969T3 373 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 SMG9Q9H0W8 520 aaKnown RBP23.42■■□□□ 1.34
SEC22C-213ENST00000456222 TNMDQ9H2S6 317 aa23.42■■□□□ 1.34
SEC22C-213ENST00000456222 MRPS17Q9Y2R5 130 aaKnown RBP23.42■■□□□ 1.34
SEC22C-213ENST00000456222 SLC38A8A6NNN8 435 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 LDHAP00338 332 aaKnown RBP23.41■■□□□ 1.34
SEC22C-213ENST00000456222 CCNE1P24864 410 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 CASP1P29466 404 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 PNPLA4P41247 253 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 MAGEA9P43362 315 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 BFSP1Q12934 665 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 ZNF528Q3MIS6 628 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 SDHAF4Q5VUM1 108 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 ZC3H14Q6PJT7 736 aaKnown RBP23.41■■□□□ 1.34
SEC22C-213ENST00000456222 CBWD2Q8IUF1 395 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 SUMF1Q8NBK3 374 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 TTC8Q8TAM2 541 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 SPPL2BQ8TCT7 592 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 PKMYT1Q99640 499 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 TMEM206Q9H813 350 aa23.41■■□□□ 1.34
SEC22C-213ENST00000456222 PRMT8Q9NR22 394 aaPredicted RBP23.41■■□□□ 1.34
SEC22C-213ENST00000456222 MAN2B1O00754 1011 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 NCAM2O15394 837 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 YEATS4O95619 227 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 HMGA1P17096 107 aaKnown RBP23.4■■□□□ 1.34
SEC22C-213ENST00000456222 PKP1Q13835 747 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 VEPH1Q14D04 833 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 EPM2AIP1Q7L775 607 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-213ENST00000456222 GPD1LQ8N335 351 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 DCLK2Q8N568 766 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 LRRC52Q8N7C0 313 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 C2orf15Q8WU43 125 aaKnown RBP23.4■■□□□ 1.34
SEC22C-213ENST00000456222 NELL1Q92832 810 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 E2F7Q96AV8 911 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 ZNF396Q96N95 335 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-213ENST00000456222 PI4K2AQ9BTU6 479 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 SLC46A2Q9BY10 475 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 CHRDQ9H2X0 955 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 TASP1Q9H6P5 420 aa23.4■■□□□ 1.34
SEC22C-213ENST00000456222 CACNA1AO00555 2505 aa23.39■■□□□ 1.34
SEC22C-213ENST00000456222 CHADO15335 359 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 CUTAO60888 179 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 KRT19P08727 400 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 ASIC1P78348 528 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 GAS6Q14393 721 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 TXNDC11Q6PKC3 985 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 YAF2Q8IY57 180 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 DCP1BQ8IZD4 617 aaKnown RBP23.39■■□□□ 1.33
SEC22C-213ENST00000456222 CACTINQ8WUQ7 758 aaKnown RBP23.39■■□□□ 1.33
SEC22C-213ENST00000456222 LMAN1LQ9HAT1 526 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 INTS13Q9NVM9 706 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 DDX43Q9NXZ2 648 aaKnown RBP23.39■■□□□ 1.33
SEC22C-213ENST00000456222 GTSE1Q9NYZ3 720 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 ITGA11Q9UKX5 1188 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 PCDHB5Q9Y5E4 795 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 SNX9Q9Y5X1 595 aa23.39■■□□□ 1.33
SEC22C-213ENST00000456222 FGF19O95750 216 aa23.38■■□□□ 1.33
SEC22C-213ENST00000456222 CHRNB1P11230 501 aa23.38■■□□□ 1.33
SEC22C-213ENST00000456222 TDGF1P13385 188 aa23.38■■□□□ 1.33
SEC22C-213ENST00000456222 TNK2Q07912 1038 aa23.38■■□□□ 1.33
SEC22C-213ENST00000456222 SMARCB1Q12824 385 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms