RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	WNT7B	P56706	349 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	GEMIN4	P57678	1058 aa	Known RBP	20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	CENPU	Q71F23	418 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	SH3TC2	Q8TF17	1288 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	EPAS1	Q99814	870 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	TLE6	Q9H808	572 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	HOMER2	Q9NSB8	354 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	LNPEP	Q9UIQ6	1025 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	RABGEF1	Q9UJ41	708 aa		20.64	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	IRF6	O14896	467 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	LMNA	P02545	664 aa	Known RBP	20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	XKR9	Q5GH70	373 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	IZUMO2	Q6UXV1	221 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZNF276	Q8N554	614 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	TUBGCP5	Q96RT8	1024 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	FCHO1	O14526	889 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	CYP1A1	P04798	512 aa	Predicted RBP	20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	SLC1A1	P43005	524 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	CCDC62	Q6P9F0	684 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	RGS9BP	Q6ZS82	235 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	TMEM179	Q6ZVK1	233 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	FBXO36	Q8NEA4	188 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	SYNC	Q9H7C4	482 aa		20.63	■□□□□ 0.89
LMBR1-213	ENST00000454132	FAM155B	O75949	473 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	YWHAB	P31946	246 aa	Known RBP	20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	RANBP1	P43487	201 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	GCLC	P48506	637 aa	Predicted RBP	20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	GPC3	P51654	580 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	SP4	Q02446	784 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	HIF1A	Q16665	826 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZNF394	Q53GI3	561 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	KCNT1	Q5JUK3	1230 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	CFAP61	Q8NHU2	1237 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZNF516	Q92618	1163 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	TDRD3	Q9H7E2	651 aa	Known RBP	20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	SAR1A	Q9NR31	198 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	CHMP2B	Q9UQN3	213 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	ECE2	O60344	883 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	LPXN	O60711	386 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	TNNI1	P19237	187 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	RC3H1	Q5TC82	1133 aa	Known RBP	20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	IFT43	Q96FT9	208 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	BICD1	Q96G01	975 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	WDR83	Q9BRX9	315 aa	Known RBP	20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	THTPA	Q9BU02	230 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	C1orf112	Q9NSG2	853 aa		20.62	■□□□□ 0.89
LMBR1-213	ENST00000454132	MEI4	A8MW99	385 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	GSTT1	P30711	240 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	RNASEH2B	Q5TBB1	312 aa	Known RBP	20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	SLC39A4	Q6P5W5	647 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	MTHFD1L	Q6UB35	978 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	MON1B	Q7L1V2	547 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	TREML1	Q86YW5	311 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	ALLC	Q8N6M5	410 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	VTI1A	Q96AJ9	217 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	SERAC1	Q96JX3	654 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	TBX20	Q9UMR3	447 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	PCDHB4	Q9Y5E5	795 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	ALOX15B	O15296	676 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	GTF2B	Q00403	316 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	PALM2	Q8IXS6	379 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	BSND	Q8WZ55	320 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	SLITRK1	Q96PX8	696 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZNF184	Q99676	751 aa	Predicted RBP	20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	GORASP1	Q9BQQ3	440 aa		20.61	■□□□□ 0.89
LMBR1-213	ENST00000454132	PLSCR1	O15162	318 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	RASA2	Q15283	850 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	AGBL1	Q96MI9	1066 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	TTC25	Q96NG3	672 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	UBE2O	Q9C0C9	1292 aa	Known RBP	20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZWINT	O95229	277 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	PYGB	P11216	843 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	ACOT2	P49753	483 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	CDK16	Q00536	496 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	AP1B1	Q10567	949 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	SEZ6	Q53EL9	994 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	CFAP157	Q5JU67	520 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	RELL1	Q8IUW5	271 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	KATNAL2	Q8IYT4	538 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	HIPK4	Q8NE63	616 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	GATA6	Q92908	595 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	GMCL1	Q96IK5	515 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	MCEE	Q96PE7	176 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	COA1	Q9GZY4	146 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	ZWILCH	Q9H900	591 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	KCND2	Q9NZV8	630 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	COL20A1	Q9P218	1284 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	PPARGC1A	Q9UBK2	798 aa	Known RBP	20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	MAGEA13P	A6NCF6	341 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	PPEF1	O14829	653 aa	Predicted RBP	20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	HNRNPDL	O14979	420 aa	Known RBP	20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	ATP2A1	O14983	1001 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	BBOX1	O75936	387 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	P4HB	P07237	508 aa	Known RBP	20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	NPTX2	P47972	431 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	PSMC5	P62195	406 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	OCRL	Q01968	901 aa		20.6	■□□□□ 0.89

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