RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 KLHL40Q2TBA0 621 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 WDR44Q5JSH3 913 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 SCARA5Q6ZMJ2 495 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 FAM114A1Q8IWE2 563 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 TCEAL8Q8IYN2 117 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 FBXL13Q8NEE6 735 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 OR6B3Q8NGW1 331 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 SUSD6Q92537 303 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 TMEM209Q96SK2 561 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 RTP3Q9BQQ7 232 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 PRKD2Q9BZL6 878 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 MAGEC2Q9UBF1 373 aaPredicted RBP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 POLIQ9UNA4 740 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 GABRDO14764 452 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 CCL16O15467 120 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 ASS1P00966 412 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 ACAT1P24752 427 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 NOP14P78316 857 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 NFE2Q16621 373 aaPredicted RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 INTS6LQ5JSJ4 861 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 LIMS2Q7Z4I7 341 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 OSTM1Q86WC4 334 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 ELMOD1Q8N336 334 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 C2orf15Q8WU43 125 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 SLC35C1Q96A29 364 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 CNOT6LQ96LI5 555 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 MRPL45Q9BRJ2 306 aaKnown RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 PI4K2AQ9BTU6 479 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 PHF7Q9BWX1 381 aaPredicted RBP15□□□□□ -0.01
GTF3C3-206ENST00000448539 THAP9Q9H5L6 903 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 RAB20Q9NX57 234 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 PRKAG3Q9UGI9 489 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 CDH9Q9ULB4 789 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 BRWD1Q9NSI6 2320 aa15□□□□□ -0.01
GTF3C3-206ENST00000448539 MTMR11A4FU01 709 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 A8MXQ7 604 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 LETM1O95202 739 aaPredicted RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SEC24AO95486 1093 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 PDGFRBP09619 1106 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 ALDH1A3P47895 512 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 FMO5P49326 533 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 MARSP56192 900 aaKnown RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 DUSP4Q13115 394 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 PLD1Q13393 1074 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 CBWD6Q4V339 395 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 CBWD3Q5JTY5 395 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 CBWD5Q5RIA9 395 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SPOPLQ6IQ16 392 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 ATAD1Q8NBU5 361 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SPPL2BQ8TCT7 592 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 KBTBD7Q8WVZ9 684 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 ELMO3Q96BJ8 720 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 ZNF707Q96C28 371 aaPredicted RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SYT15Q9BQS2 421 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 RHOBTB2Q9BYZ6 727 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 DNAI2Q9GZS0 605 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 NIF3L1Q9GZT8 377 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 SMYD3Q9H7B4 428 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 PCDHB5Q9Y5E4 795 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 INSL5Q9Y5Q6 135 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 PLXNA3P51805 1871 aa14.99□□□□□ -0.01
GTF3C3-206ENST00000448539 P4HA2O15460 535 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 AFPP02771 609 aaKnown RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 COL9A1P20849 921 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 LMO2P25791 158 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 MTIF2P46199 727 aaKnown RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 RAP1GAPP47736 663 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 TUFMP49411 452 aaKnown RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 TWF1Q12792 350 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 KCNH2Q12809 1159 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 MAPRE1Q15691 268 aaKnown RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 MGAT5BQ3V5L5 792 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 LRRTM3Q86VH5 581 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 SPATA2LQ8IUW3 424 aaPredicted RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 TRIM59Q8IWR1 403 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 ADHFE1Q8IWW8 467 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 SEMA4DQ92854 862 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 MED15Q96RN5 788 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 SEPT5Q99719 369 aaPredicted RBP14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 POMKQ9H5K3 350 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 CYP3A43Q9HB55 503 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 HSFX1Q9UBD0 423 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 CDH22Q9UJ99 828 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 SLC27A5Q9Y2P5 690 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 NR2E1Q9Y466 385 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 YIPF1Q9Y548 306 aa14.98□□□□□ -0.01
GTF3C3-206ENST00000448539 POU2F2P09086 479 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 SSTR3P32745 418 aaPredicted RBP14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 ASPAP45381 313 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 CDR1P51861 262 aa14.97□□□□□ -0.01
GTF3C3-206ENST00000448539 EPHB3P54753 998 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms