RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 HELQQ8TDG4 1101 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
CALD1-210ENST00000443197 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 RARAP10276 462 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 RBP3P10745 1247 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 CA4P22748 312 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 ARL1P40616 181 aaPredicted RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 MSH2P43246 934 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 SARNPP82979 210 aaKnown RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 MFSD10Q14728 455 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 CCDC14Q49A88 953 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 SPATA18Q8TC71 538 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 SMC6Q96SB8 1091 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 RBM15Q96T37 977 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALD1-210ENST00000443197 C10orf88Q9H8K7 445 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 CPP00450 1065 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 RTP1P59025 263 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 IRX4P78413 519 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 MXRA7P84157 204 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 TSEN2Q8NCE0 465 aaKnown RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 VIPAS39Q9H9C1 493 aa11.15□□□□□ -0.62
CALD1-210ENST00000443197 DDX56Q9NY93 547 aaKnown RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 SAE1Q9UBE0 346 aaPredicted RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 PRG3Q9Y2Y8 225 aaPredicted RBP11.15□□□□□ -0.62
CALD1-210ENST00000443197 RASA4BC9J798 803 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 RASA4O43374 803 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 FECHP22830 423 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 ARL2P36404 184 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 ZRSR2Q15696 482 aaKnown RBP11.15□□□□□ -0.63
CALD1-210ENST00000443197 SH3D19Q5HYK7 790 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 LGSNQ5TDP6 509 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 FAXCQ5TGI0 409 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 VSIG1Q86XK7 387 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 TTC13Q8NBP0 860 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 RNF139Q8WU17 664 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 ARHGEF2Q92974 986 aaKnown RBP11.15□□□□□ -0.63
CALD1-210ENST00000443197 IFT122Q9HBG6 1241 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 WDR35Q9P2L0 1181 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 TSPAN16Q9UKR8 245 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 UBQLN1Q9UMX0 589 aaKnown RBP11.15□□□□□ -0.63
CALD1-210ENST00000443197 COG5Q9UP83 839 aa11.15□□□□□ -0.63
CALD1-210ENST00000443197 CASTOR2A6NHX0 329 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 ICAM3P32942 547 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 MNAT1P51948 309 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 JAM2P57087 298 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 TAP1Q03518 808 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 SETDB1Q15047 1291 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 ASTE1Q2TB18 679 aaPredicted RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 IQSEC1Q6DN90 963 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 CPNE8Q86YQ8 564 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 KCNN4O15554 427 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 RECQL4O94761 1208 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 UPP2O95045 317 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 CD4P01730 458 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 MCF2P10911 925 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 TAF6P49848 677 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 AP1B1Q10567 949 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 FSCN1Q16658 493 aaKnown RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 DENND1BQ6P3S1 775 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 C12orf29Q8N999 325 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 FAM71DQ8N9W8 422 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 CCHCR1Q8TD31 782 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 NTPCRQ9BSD7 190 aaKnown RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 MRPL42Q9Y6G3 142 aaKnown RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 POMCP01189 267 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 APRTP07741 180 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 GHRP10912 638 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 SEC24CP53992 1094 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 FCGRTP55899 365 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 FAM47EQ6ZV65 393 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 PRUNE1Q86TP1 453 aa11.14□□□□□ -0.63
CALD1-210ENST00000443197 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
CALD1-210ENST00000443197 GPR25O00155 361 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SRGAP2BP0DMP2 458 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 GPD1P21695 349 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 EIF4BP23588 611 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 ARL4CP56559 192 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ROR1Q01973 937 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 NUGGCQ68CJ6 796 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 C11orf63Q6NUN7 778 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ZNF662Q6ZS27 426 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 TMEM192Q8IY95 271 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms