RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 IFNB1P01574 187 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 WDR72Q3MJ13 1102 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 DENND1AQ8TEH3 1009 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 STAMBPL1Q96FJ0 436 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 ACAD9Q9H845 621 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 AS3MTQ9HBK9 375 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 DDX56Q9NY93 547 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 SHOC2Q9UQ13 582 aa17.4■□□□□ 0.38
SEMA3B-207ENST00000441915 SGK1O00141 431 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ALOX15BO15296 676 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 EGFRP00533 1210 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ASS1P00966 412 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 CST3P01034 146 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ITGAVP06756 1048 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 CCND1P24385 295 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 GBP2P32456 591 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 PTPN7P35236 360 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 AP3M2P53677 418 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 SP2Q02086 613 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TAP1Q03518 808 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 PKN2Q16513 984 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TMEM121Q9BTD3 319 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 KIF9Q9HAQ2 790 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 PCDH9Q9HC56 1237 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 COL11A1P12107 1806 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 PARP14Q460N5 1801 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 CA4P22748 312 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 LACTBP83111 547 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 PDIA2Q13087 525 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TMEM132BQ14DG7 1078 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ACCSLQ4AC99 568 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 RNASEH2BQ5TBB1 312 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 C4orf33Q8N1A6 199 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 FAXDC2Q96IV6 333 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 ETNK1Q9HBU6 452 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TXLNGQ9NUQ3 528 aa17.39■□□□□ 0.37
SEMA3B-207ENST00000441915 TCRBV5S1A1TA0A578 114 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ANP32DO95626 131 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 RPSAP08865 295 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 CDKN2BP42772 138 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 TGFB2P61812 414 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 OGDHQ02218 1023 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 MYO1EQ12965 1108 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ZNF394Q53GI3 561 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 TXNRD3NBQ6F5E7 133 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 RGS9BPQ6ZS82 235 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 UBR7Q8N806 425 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ACSF2Q96CM8 615 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 RSRC1Q96IZ7 334 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ZNF518BQ9C0D4 1074 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 NOP53Q9NZM5 478 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 SLC24A2Q9UI40 661 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 TRIM33Q9UPN9 1127 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 USH1CQ9Y6N9 552 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ATG7O95352 703 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 EDN1P05305 212 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 YARSP54577 528 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 HMGCS2P54868 508 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ATP11AP98196 1134 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 PDK4Q16654 411 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 VSIG1Q86XK7 387 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 WDR49Q8IV35 697 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 BRSK2Q8IWQ3 736 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 LRRC8CQ8TDW0 803 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 PRCCQ92733 491 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 LRRC37BQ96QE4 947 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 PSMC3IPQ9P2W1 217 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
SEMA3B-207ENST00000441915 ATP5HO75947 161 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 DPEP1P16444 411 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 RPA3P35244 121 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 STXBP2Q15833 593 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 CCDC142Q17RM4 750 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 GPAT2Q6NUI2 795 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 ERICH1Q86X53 443 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 ANKLE1Q8NAG6 615 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 ERP27Q96DN0 273 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 MRRFQ96E11 262 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 RAB3IPQ96QF0 476 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 TCHPQ9BT92 498 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 CISHQ9NSE2 258 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 KCNA3P22001 575 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 EIF4BP23588 611 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 ALDH3A1P30838 453 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 RASA2Q15283 850 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 HIF1AQ16665 826 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 SCARA3Q6AZY7 606 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 TLDC1Q6P9B6 456 aa17.37■□□□□ 0.37
SEMA3B-207ENST00000441915 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms