RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SEMA4DQ92854 862 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 ZNF707Q96C28 371 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 PRKD2Q9BZL6 878 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 SMYD3Q9H7B4 428 aa20.86■□□□□ 0.93
SEMA3B-206ENST00000439487 MTMR11A4FU01 709 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 CCL16O15467 120 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 LMO2P25791 158 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 MTHFRP42898 656 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 RAP1GAPP47736 663 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 CDH8P55286 799 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 CBX2Q14781 532 aaPredicted RBP20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 ATAT1Q5SQI0 421 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 CREBRFQ8IUR6 639 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 TCEAL8Q8IYN2 117 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 SMG7Q92540 1137 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 RIPOR3Q96MK2 946 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 ACBD6Q9BR61 282 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 CRISPLD1Q9H336 500 aa20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 APOBEC3GQ9HC16 384 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-206ENST00000439487 TACC1O75410 805 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 PDGFRBP09619 1106 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 HNRNPA1P09651 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 CCDC192P0DO97 292 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 PTMSP20962 102 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 MARSP56192 900 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 TSPY1Q01534 308 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 DUSP4Q13115 394 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 KLHL40Q2TBA0 621 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 CT47A1Q5JQC4 288 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 INTS6LQ5JSJ4 861 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 IRF2BP1Q8IU81 584 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 TRIM59Q8IWR1 403 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 DCP1BQ8IZD4 617 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 ATAD1Q8NBU5 361 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 FBXL13Q8NEE6 735 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 OR6B3Q8NGW1 331 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 CNOT6LQ96LI5 555 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 NECAB3Q96P71 396 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 SDCBP2Q9H190 292 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 SNX25Q9H3E2 840 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 POMKQ9H5K3 350 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 PIDD1Q9HB75 910 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 TMLHEQ9NVH6 421 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 ANO10Q9NW15 660 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 RAB20Q9NX57 234 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 SLC27A5Q9Y2P5 690 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 NME7Q9Y5B8 376 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 INSL5Q9Y5Q6 135 aa20.84■□□□□ 0.93
SEMA3B-206ENST00000439487 PAPLNO95428 1278 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 FAM163BP0C2L3 166 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 P4HA1P13674 534 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 PCSK1P29120 753 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 GNL1P36915 607 aaPredicted RBP20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 FMO5P49326 533 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 NOP14P78316 857 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 STX1AQ16623 288 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 C11orf57Q6ZUT1 292 aaPredicted RBP20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 TTC9BQ8N6N2 239 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 ADAMTS19Q8TE59 1207 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 NECTIN4Q96NY8 510 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 MAFFQ9ULX9 164 aa20.83■□□□□ 0.93
SEMA3B-206ENST00000439487 ATP2C2O75185 946 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 LRG1P02750 347 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 HOXA9P31269 272 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 ASPAP45381 313 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 PSMC1P62191 440 aaKnown RBP20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 KCNH2Q12809 1159 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 CCDC142Q17RM4 750 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 CYP26C1Q6V0L0 522 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 RTL10Q7L3V2 364 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 CCDC150Q8NCX0 1101 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 PKMYT1Q99640 499 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 SYT15Q9BQS2 421 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 THAP9Q9H5L6 903 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 GTF3C4Q9UKN8 822 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 CDH9Q9ULB4 789 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 COQ4Q9Y3A0 265 aa20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.82■□□□□ 0.92
SEMA3B-206ENST00000439487 GREB1Q4ZG55 1949 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 MYBPHLA2RUH7 354 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 XYLBO75191 536 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 TYRO3Q06418 890 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 TWF1Q12792 350 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 HSP90AA4PQ58FG1 418 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 TATDN2Q93075 761 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 LPIN3Q9BQK8 851 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 PHF7Q9BWX1 381 aaPredicted RBP20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 RHOBTB2Q9BYZ6 727 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 DPEP3Q9H4B8 488 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 ABI2Q9NYB9 513 aaPredicted RBP20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 YIPF1Q9Y548 306 aa20.81■□□□□ 0.92
SEMA3B-206ENST00000439487 A8MXQ7 604 aa20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 SOAT2O75908 522 aa20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 AFPP02771 609 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 SP100P23497 879 aaPredicted RBP20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 NTHL1P78549 312 aa20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 SMARCB1Q12824 385 aa20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 WDR44Q5JSH3 913 aa20.8■□□□□ 0.92
SEMA3B-206ENST00000439487 FAM171BQ6P995 826 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms