RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 HSPA7P48741 367 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 NRG3P56975 720 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 PFKPQ01813 784 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 ARL13BQ3SXY8 428 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 CCDC152Q4G0S7 254 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 MCMDC2Q4G0Z9 681 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 CCDC158Q5M9N0 1113 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 TTC39AQ5SRH9 613 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 ZNF772Q68DY9 489 aaPredicted RBP7.14□□□□□ -1.27
SPEN-202ENST00000438066 PDZD4Q76G19 769 aaPredicted RBP7.14□□□□□ -1.27
SPEN-202ENST00000438066 AMIGO3Q86WK7 504 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 GPR156Q8NFN8 814 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.14□□□□□ -1.27
SPEN-202ENST00000438066 SAMD11Q96NU1 681 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 SEC62Q99442 399 aaKnown RBP7.14□□□□□ -1.27
SPEN-202ENST00000438066 BCAS3Q9H6U6 928 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 HELLSQ9NRZ9 838 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 PNPOQ9NVS9 261 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 KCMF1Q9P0J7 381 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 HMG20BQ9P0W2 317 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 MAGEL2Q9UJ55 1249 aa7.14□□□□□ -1.27
SPEN-202ENST00000438066 MAST3O60307 1309 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 FITM1A5D6W6 292 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 GSC2O15499 205 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SGTAO43765 313 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 CYBBP04839 570 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 TYRP14679 529 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 FSTP19883 344 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SMARCA1P28370 1054 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ADSLP30566 484 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 HOXA10P31260 410 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 STAT5AP42229 794 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 GATA4P43694 442 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SUMO3P55854 103 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 CDC42EP1Q00587 391 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 MPEG1Q2M385 716 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 TEPPQ6URK8 271 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 TREML4Q6UXN2 200 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 KRBA2Q6ZNG9 492 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 CCDC129Q6ZRS4 1044 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 RUFY3Q7L099 469 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ANKRD18AQ8IVF6 992 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 JAKMIP1Q96N16 626 aaKnown RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 OR10A5Q9H207 317 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 PRDM7Q9NQW5 492 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 GJB4Q9NTQ9 266 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 GRHPRQ9UBQ7 328 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 GPR160Q9UJ42 338 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 PCDHA6Q9UN73 950 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 WASF3Q9UPY6 502 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 CHD4Q14839 1912 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 A0A0A6YYK5 440 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 ZNF839A8K0R7 811 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ISM1B1AKI9 464 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 RNF113AO15541 343 aaKnown RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 TMEM127O75204 238 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SEC24DO94855 1032 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 RHOBTB3O94955 611 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ZFYP08048 801 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 ENO2P09104 434 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 CPA1P15085 419 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 NPR1P16066 1061 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 CASP2P42575 452 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 KCNJ4P48050 445 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ERVFC1P60507 584 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 NUCB2P80303 420 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 TARDBPQ13148 414 aaKnown RBP eCLIP7.13□□□□□ -1.27
SPEN-202ENST00000438066 PKP1Q13835 747 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SF3B3Q15393 1217 aaKnown RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 SLC35G1Q2M3R5 365 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SLC10A5Q5PT55 438 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 TBC1D9BQ66K14 1250 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 MZT2AQ6P582 158 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 FAM180AQ6UWF9 173 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SMIM5Q71RC9 77 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 RSPH3Q86UC2 560 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ZDHHC13Q8IUH4 622 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 WDR48Q8TAF3 677 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 LPIN2Q92539 896 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ZNF775Q96BV0 537 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 SOX7Q9BT81 388 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 INO80BQ9C086 356 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 TNFRSF12AQ9NP84 129 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 SRP68Q9UHB9 627 aaKnown RBP7.13□□□□□ -1.27
SPEN-202ENST00000438066 CYP46A1Q9Y6A2 500 aa7.13□□□□□ -1.27
SPEN-202ENST00000438066 SKAP2O75563 359 aaPredicted RBP7.12□□□□□ -1.27
SPEN-202ENST00000438066 ZBTB7AO95365 584 aa7.12□□□□□ -1.27
SPEN-202ENST00000438066 SDHBP21912 280 aa7.12□□□□□ -1.27
SPEN-202ENST00000438066 TRHRP34981 398 aaPredicted RBP7.12□□□□□ -1.27
SPEN-202ENST00000438066 PHKA1P46020 1223 aa7.12□□□□□ -1.27
SPEN-202ENST00000438066 SLC6A9P48067 706 aa7.12□□□□□ -1.27
SPEN-202ENST00000438066 GALNT1Q10472 559 aaPredicted RBP7.12□□□□□ -1.27
SPEN-202ENST00000438066 GRM1Q13255 1194 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms