RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 CPB1P15086 417 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 PON1P27169 355 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 CUL2Q13617 745 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 INTS6LQ5JSJ4 861 aaKnown RBP19.43■□□□□ 0.7
IRF1-203ENST00000437654 FAM171BQ6P995 826 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 CYP26C1Q6V0L0 522 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 CCDC149Q6ZUS6 474 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
IRF1-203ENST00000437654 PALB2Q86YC2 1186 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 CRYBG2Q8N1P7 616 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 MICALL1Q8N3F8 863 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 OR10T2Q8NGX3 314 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 MAFAQ8NHW3 353 aaPredicted RBP19.43■□□□□ 0.7
IRF1-203ENST00000437654 SMYD3Q9H7B4 428 aa19.43■□□□□ 0.7
IRF1-203ENST00000437654 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 LGALS16A8MUM7 142 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 ADAM12O43184 909 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 WEE2P0C1S8 567 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 RFX1P22670 979 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 LMO2P25791 158 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 ELF1P32519 619 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 MFAP3P55082 362 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 CDH8P55286 799 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 OSTM1Q86WC4 334 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 TCEAL8Q8IYN2 117 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 KREMEN2Q8NCW0 462 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 SPPL2BQ8TCT7 592 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 SDCBP2Q9H190 292 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 ABCB6Q9NP58 842 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 PLCB1Q9NQ66 1216 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 FBXW11Q9UKB1 542 aa19.42■□□□□ 0.7
IRF1-203ENST00000437654 CILPO75339 1184 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 SLC9A1P19634 815 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 HOXA9P31269 272 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 TUFMP49411 452 aaKnown RBP19.41■□□□□ 0.7
IRF1-203ENST00000437654 KCNMA1Q12791 1236 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 CCDC85BQ15834 202 aaPredicted RBP19.41■□□□□ 0.7
IRF1-203ENST00000437654 PHLDB3Q6NSJ2 640 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 C4orf50Q6ZRC1 276 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 GLYCTKQ8IVS8 523 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 PPM1KQ8N3J5 372 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 HLA-CQ95604 372 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 FUBP3Q96I24 572 aaKnown RBP eCLIP19.41■□□□□ 0.7
IRF1-203ENST00000437654 ERGIC2Q96RQ1 377 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 PKMYT1Q99640 499 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 SYT15Q9BQS2 421 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 NT5C1AQ9BXI3 368 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 RHOBTB2Q9BYZ6 727 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
IRF1-203ENST00000437654 CISHQ9NSE2 258 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 ZDHHC7Q9NXF8 308 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 APEX2Q9UBZ4 518 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 CHD7Q9P2D1 2997 aa19.41■□□□□ 0.7
IRF1-203ENST00000437654 SERPINC1P01008 464 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 POU2F2P09086 479 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 PDGFRBP09619 1106 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 HNRNPA1P09651 372 aaKnown RBP eCLIP19.4■□□□□ 0.7
IRF1-203ENST00000437654 EPCAMP16422 314 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 PTPN1P18031 435 aaKnown RBP19.4■□□□□ 0.7
IRF1-203ENST00000437654 GTF2F1P35269 517 aaKnown RBP eCLIP19.4■□□□□ 0.7
IRF1-203ENST00000437654 NDST1P52848 882 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 ARPP19P56211 112 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 UBXN1Q04323 297 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 LRMPQ12912 555 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 ANKRD54Q6NXT1 300 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 RNF19BQ6ZMZ0 732 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 LRRTM3Q86VH5 581 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 CMASQ8NFW8 434 aaPredicted RBP19.4■□□□□ 0.7
IRF1-203ENST00000437654 MYCBPAPQ8TBZ2 947 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 CLDND1Q9NY35 253 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 KIAA1257Q9ULG3 409 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 PCDHB5Q9Y5E4 795 aa19.4■□□□□ 0.7
IRF1-203ENST00000437654 PRRC2BQ5JSZ5 2229 aaKnown RBP19.39■□□□□ 0.69
IRF1-203ENST00000437654 A0A1B0GTH6 734 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 ZMYND10O75800 440 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 GLP2RO95838 553 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 ITIH3Q06033 890 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 ADCY1Q08828 1119 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 SKIV2LQ15477 1246 aaKnown RBP19.39■□□□□ 0.69
IRF1-203ENST00000437654 CFAP221Q4G0U5 840 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 SLC39A12Q504Y0 691 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 LIN9Q5TKA1 542 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 UBR7Q8N806 425 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 VN1R2Q8NFZ6 395 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 ELMO3Q96BJ8 720 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 CEP295NLQ96MC4 621 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 TMEM209Q96SK2 561 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 SFXN1Q9H9B4 322 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 UBE2TQ9NPD8 197 aaPredicted RBP19.39■□□□□ 0.69
IRF1-203ENST00000437654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.39■□□□□ 0.69
IRF1-203ENST00000437654 MAN1C1Q9NR34 630 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 GTF3C4Q9UKN8 822 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 CNTN6Q9UQ52 1028 aa19.39■□□□□ 0.69
IRF1-203ENST00000437654 A0A1W2PQC6 194 aa19.38■□□□□ 0.69
IRF1-203ENST00000437654 MTMR11A4FU01 709 aa19.38■□□□□ 0.69
IRF1-203ENST00000437654 ACAT1P24752 427 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms