RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 INTS13Q9NVM9 706 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 IMPAD1Q9NX62 359 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 SLC30A1Q9Y6M5 507 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 A0A1W2PQC6 194 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 F5H6K3 240 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 UCHL3P15374 230 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 LTKP29376 864 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 GTF2H1P32780 548 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 KLRC3Q07444 240 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 NAIF1Q69YI7 327 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 REXO1L1PQ8IX06 675 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 OMA1Q96E52 524 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 CPSF4O95639 269 aaKnown RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 ATP12AP54707 1039 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 OR6J1Q8NGC5 347 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 ZNF669Q96BR6 464 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 A0A1B0GW55 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 CDH16O75309 829 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 FAM107AO95990 144 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L2P0CJ85 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L3P0CJ86 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L4P0CJ87 422 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L5P0CJ88 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L6P0CJ89 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4L7P0CJ90 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 RALBP11234 206 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 POU4F1Q01851 419 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DPYDQ12882 1025 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 SYDE1Q6ZW31 735 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DUX4Q9UBX2 424 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 UBXN8O00124 270 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 NR5A2O00482 541 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 SFNP31947 248 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 FLT3P36888 993 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 CALML6Q8TD86 181 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-206ENST00000431893 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
SEC16A-206ENST00000431893 CST8O60676 142 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 RAD51Q06609 339 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 COG2Q14746 738 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 TRIM71Q2Q1W2 868 aaKnown RBP11.9□□□□□ -0.51
SEC16A-206ENST00000431893 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 SH3TC2Q8TF17 1288 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 SIKE1Q9BRV8 207 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 SPATA2Q9UM82 520 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.51
SEC16A-206ENST00000431893 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SRGNP10124 158 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 GEMIN4P57678 1058 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SNRNP35Q16560 246 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 KHDRBS2Q5VWX1 349 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MRPS26Q9BYN8 205 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MAGEA13PA6NCF6 341 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 POLBP06746 335 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 ELMSAN1Q6PJG2 1045 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MAGEB10Q96LZ2 347 aaPredicted RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SPRTNQ9H040 489 aaPredicted RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 HDHD2Q9H0R4 259 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 PMPCBO75439 489 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 TADA2AO75478 443 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 ENDOD1O94919 500 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 ZNF682O95780 498 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 PSMA4P25789 261 aaKnown RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 CDC25CP30307 473 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 SCARF1Q14162 830 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 JPH1Q9HDC5 661 aaPredicted RBP11.89□□□□□ -0.51
SEC16A-206ENST00000431893 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MYMKA6NI61 221 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 FAM25AB3EWG3 89 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 FAM25CB3EWG5 89 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 FAM25GB3EWG6 89 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 F8W810 466 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MT-CO1P00395 513 aa11.89□□□□□ -0.51
SEC16A-206ENST00000431893 MMP10P09238 476 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms