RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 FCGRTP55899 365 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 ZNF252P-AS1Q0IIN9 211 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 MYO1EQ12965 1108 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 CCDC137Q6PK04 289 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 DPH6Q7L8W6 267 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 TRIB2Q92519 343 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 C18orf25Q96B23 403 aaPredicted RBP23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 BARX2Q9UMQ3 279 aaPredicted RBP23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 FAM187AA6NFU0 413 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 MICAL2O94851 1124 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 GNAT1P11488 350 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 PTGIRP43119 386 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 NDST1P52848 882 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 INCA1Q0VD86 236 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 CYP1B1Q16678 543 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 CCDC50Q8IVM0 306 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 C3orf20Q8ND61 904 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 HEXIM2Q96MH2 286 aaKnown RBP23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 FAM114A2Q9NRY5 505 aa23.04■■□□□ 1.28
CNEP1R1-202ENST00000427478 GOLGA8SH3BPF8 625 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 FSCN2O14926 492 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 HSF2BPO75031 334 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 CYBAP13498 195 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 HOXC8P31273 242 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 CRYBB1P53674 252 aaPredicted RBP23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 OGDHQ02218 1023 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 GNASQ5JWF2 1037 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 PPP1R15BQ5SWA1 713 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 MREGQ8N565 214 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 ERP44Q9BS26 406 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 HERPUD2Q9BSE4 406 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 PCYOX1Q9UHG3 505 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 RASAL2Q9UJF2 1139 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 STRIP2Q9ULQ0 834 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 M0QYV0 167 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 ZBTB6Q15916 424 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 BEST2Q8NFU1 509 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 KLK14Q9P0G3 267 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 CNTN3Q9P232 1028 aa23.03■■□□□ 1.28
CNEP1R1-202ENST00000427478 CENPFP49454 3210 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 RNF40O75150 1001 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 PGK1P00558 417 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 VDRP11473 427 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 COILP38432 576 aaPredicted RBP23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 MFSD14CQ5VZR4 134 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 DUPD1Q68J44 220 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 CPXM1Q96SM3 734 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 SNX9Q9Y5X1 595 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 TCF4P15884 667 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 FLT3LGP49771 235 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 TAP1Q03518 808 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 SGO2Q562F6 1265 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 ALS2CLQ60I27 953 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 CXCL17Q6UXB2 119 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 ALKAL1Q6UXT8 129 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 CCDC105Q8IYK2 499 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 KATNAL2Q8IYT4 538 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 C1orf54Q8WWF1 131 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 ZIM3Q96PE6 472 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 SYNCQ9H7C4 482 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 KLHL11Q9NVR0 708 aa23.02■■□□□ 1.28
CNEP1R1-202ENST00000427478 KCNJ1P48048 391 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 GJA9P57773 515 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 PSMC1P62191 440 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 GLIPR1L2Q4G1C9 344 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 UBXN11Q5T124 520 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 NME8Q8N427 588 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 C12orf50Q8NA57 414 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 RUFY1Q96T51 708 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 MTG1Q9BT17 334 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 NT5C1AQ9BXI3 368 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 PTPN22Q9Y2R2 807 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 SCN10AQ9Y5Y9 1956 aa23.01■■□□□ 1.27
CNEP1R1-202ENST00000427478 F8VP50 259 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 ERBB2P04626 1255 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 RALAP11233 206 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 HSPA9P38646 679 aaKnown RBP23■■□□□ 1.27
CNEP1R1-202ENST00000427478 TRIM32Q13049 653 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 CNGA2Q16280 664 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 CFAP58Q5T655 872 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 CYP4F22Q6NT55 531 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 UBA3Q8TBC4 463 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 MRPL45Q9BRJ2 306 aaKnown RBP23■■□□□ 1.27
CNEP1R1-202ENST00000427478 HEMGNQ9BXL5 484 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 RNF39Q9H2S5 420 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 PARP2Q9UGN5 583 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 FLT3P36888 993 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 FNTAP49354 379 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 TTC39CQ8N584 583 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 RUNDC3BQ96NL0 473 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 LRRC19Q9H756 370 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 SNX24Q9Y343 169 aa23■■□□□ 1.27
CNEP1R1-202ENST00000427478 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 KPNA6O60684 536 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 HMGCRP04035 888 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 PRKCZQ05513 592 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 PDCLQ13371 301 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 SNX1Q13596 522 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 ATP13A4Q4VNC1 1196 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms