RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
SCRN1-205ENST00000425819 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 ZBED2Q9BTP6 218 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
SCRN1-205ENST00000425819 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 ADAM28Q9UKQ2 775 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 PCDHA13Q9Y5I0 950 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 SLC4A7Q9Y6M7 1214 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
SCRN1-205ENST00000425819 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ESPNB1AK53 854 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 GABRDO14764 452 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 GJB5O95377 273 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ALDH7A1P49419 539 aaKnown RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 TMEM173Q86WV6 379 aaPredicted RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 PASD1Q8IV76 773 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 BCL7CQ8WUZ0 217 aaPredicted RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 TAS2R14Q9NYV8 317 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 DSEQ9UL01 958 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 PCDHB8Q9UN66 801 aa16.79■□□□□ 0.28
SCRN1-205ENST00000425819 MRPL42Q9Y6G3 142 aaKnown RBP16.79■□□□□ 0.28
SCRN1-205ENST00000425819 ZSCAN12O43309 604 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 CYP11A1P05108 521 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 VDRP11473 427 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 MAGEA1P43355 309 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 LHX1P48742 406 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 PSMC1P62191 440 aaKnown RBP16.78■□□□□ 0.28
SCRN1-205ENST00000425819 SGO2Q562F6 1265 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 C12orf29Q8N999 325 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 FAM49BQ9NUQ9 324 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 NENFQ9UMX5 172 aa16.78■□□□□ 0.28
SCRN1-205ENST00000425819 ARHGEF37A1IGU5 675 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 MED7O43513 233 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 ATP2C2O75185 946 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
SCRN1-205ENST00000425819 TYMPP19971 482 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 TKTP29401 623 aaKnown RBP16.77■□□□□ 0.28
SCRN1-205ENST00000425819 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
SCRN1-205ENST00000425819 CLEC16AQ2KHT3 1053 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 OVOS1Q6IE37 1185 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 FUT10Q6P4F1 479 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 KCNT2Q6UVM3 1135 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 HERC6Q8IVU3 1022 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 REXO1L1PQ8IX06 675 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 CRYBG2Q8N1P7 616 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 CYFIP2Q96F07 1278 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 PPP1R13BQ96KQ4 1090 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 SLC9A7Q96T83 725 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 PACSIN1Q9BY11 444 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 MTIF3Q9H2K0 278 aaKnown RBP16.77■□□□□ 0.28
SCRN1-205ENST00000425819 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
SCRN1-205ENST00000425819 RCCD1A6NED2 376 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 VAV2P52735 878 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 HTRA4P83105 476 aaPredicted RBP16.77■□□□□ 0.27
SCRN1-205ENST00000425819 CCDC142Q17RM4 750 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 FAM171A1Q5VUB5 890 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 NAA35Q5VZE5 725 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 DENND1BQ6P3S1 775 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 CEP57Q86XR8 500 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 TNIP3Q96KP6 325 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 B3GALT6Q96L58 329 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 ZNF558Q96NG5 402 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 RTP3Q9BQQ7 232 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 SYT15Q9BQS2 421 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 DNAI2Q9GZS0 605 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 LZTFL1Q9NQ48 299 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.27
SCRN1-205ENST00000425819 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.77■□□□□ 0.27
SCRN1-205ENST00000425819 SF3B1O75533 1304 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 O00370 1275 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CCP110O43303 1012 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 MICAL2O94851 1124 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CYP1A1P04798 512 aaPredicted RBP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CCDC130P13994 396 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 LAG3P18627 525 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CDR1P51861 262 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 YWHAHQ04917 246 aaPredicted RBP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CNGA2Q16280 664 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 C9orf50Q5SZB4 431 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 PPP1R26Q5T8A7 1209 aaPredicted RBP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 TRIM72Q6ZMU5 477 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 SPATA18Q8TC71 538 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 CPA5Q8WXQ8 436 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 LUC7LQ9NQ29 371 aaKnown RBP16.76■□□□□ 0.27
SCRN1-205ENST00000425819 KCND1Q9NSA2 647 aa16.76■□□□□ 0.27
SCRN1-205ENST00000425819 INSL6Q9Y581 213 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms