RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 FERMT3Q86UX7 667 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 ARID3BQ8IVW6 561 aaPredicted RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 SPACA3Q8IXA5 215 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 CEP76Q8TAP6 659 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 TMEM143Q96AN5 459 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 CHFRQ96EP1 664 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 WBP1Q96G27 269 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 NAF1Q96HR8 494 aaKnown RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 CNOT6LQ96LI5 555 aaKnown RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 MTMR9Q96QG7 549 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 JPH2Q9BR39 696 aaPredicted RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 NXF3Q9H4D5 531 aaKnown RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 RGL1Q9NZL6 768 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 KIAA1522Q9P206 1035 aaPredicted RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 MTRRQ9UBK8 725 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 COL4A3BPQ9Y5P4 624 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 INSL5Q9Y5Q6 135 aa6.2□□□□□ -1.42
HDAC8-212ENST00000421523 HELZP42694 1942 aaKnown RBP6.2□□□□□ -1.42
HDAC8-212ENST00000421523 MYO16Q9Y6X6 1858 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 TLN1Q9Y490 2541 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 OTOL1A6NHN0 477 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 I3L4J1 428 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 TRDMT1O14717 391 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ASAP2O43150 1006 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ATMINO43313 823 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CCNT1O60563 726 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 GJB3O75712 270 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 LARGE1O95461 756 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SEC24AO95486 1093 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PRAMEF12O95522 483 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CR2P20023 1033 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 POU3F2P20265 443 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 HOXD12P35452 270 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ARL2P36404 184 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 RFC5P40937 340 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 DPP6P42658 865 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SEC13P55735 322 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ANAPC15P60006 121 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PTENP60484 403 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ROR1Q01973 937 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 RPL6Q02878 288 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 LAMTOR4Q0VGL1 99 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 TWF1Q12792 350 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 GRIK3Q13003 919 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 NR5A1Q13285 461 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SERINC3Q13530 473 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CTTNQ14247 550 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 NBR1Q14596 966 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PCBP1Q15365 356 aaKnown RBP eCLIP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PLEKHG6Q3KR16 790 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PEAR1Q5VY43 1037 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CPLX2Q6PUV4 134 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 DHRS13Q6UX07 377 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 RTL10Q7L3V2 364 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 RASSF3Q86WH2 238 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 EXOC8Q8IYI6 725 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CCDC33Q8N5R6 958 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PSPC1Q8WXF1 523 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SLC7A3Q8WY07 619 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 DYDC2Q96IM9 177 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 LGMNQ99538 433 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 LXNQ9BS40 222 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 POLR3CQ9BUI4 534 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 NFKBIZQ9BYH8 718 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 TRIM6Q9C030 488 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SMG9Q9H0W8 520 aaKnown RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 SLKQ9H2G2 1235 aaPredicted RBP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 EBF3Q9H4W6 596 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 ZSWIM4Q9H7M6 989 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 HSPBP1Q9NZL4 362 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 CEP72Q9P209 647 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 BCCIPQ9P287 314 aaKnown RBP eCLIP6.19□□□□□ -1.42
HDAC8-212ENST00000421523 KIAA1549LQ6ZVL6 1849 aa6.19□□□□□ -1.42
HDAC8-212ENST00000421523 PDZD2O15018 2839 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 A0A1B0GUA9 196 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 BTBD18B2RXH4 712 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 TSPAN1O60635 241 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 DKC1O60832 514 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 CDKL5O76039 1030 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 SRGAP2CP0DJJ0 459 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 XRCC6P12956 609 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 ARF4P18085 180 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 DRD1P21728 446 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 IGFBP6P24592 240 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 TKTP29401 623 aaKnown RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 AXLP30530 894 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 P2RY2P41231 377 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 RARRES1P49788 294 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 GALK1P51570 392 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 TMPRSS3P57727 454 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PLCB2Q00722 1185 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 MBTD1Q05BQ5 628 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 MYO1EQ12965 1108 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 GRIK2Q13002 908 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 EMC2Q15006 297 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PTPAQ15257 358 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 SMAD1Q15797 465 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms