RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 A0A1W2PQ64 194 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 A0A1W2PQD8 194 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 CHADO15335 359 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 TRAPPC3O43617 180 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 TRAK2O60296 914 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 RPP40O75818 363 aaKnown RBP19.49■□□□□ 0.71
VCP-202ENST00000417448 MPLP40238 635 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 SYKP43405 635 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 KPNA1P52294 538 aaPredicted RBP19.49■□□□□ 0.71
VCP-202ENST00000417448 EFNA5P52803 228 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 SMTNP53814 917 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 TWF1Q12792 350 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 CUL4BQ13620 913 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 PON2Q15165 354 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 C1orf228Q6PIY5 440 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 CACNA2D4Q7Z3S7 1137 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 GPIHBP1Q8IV16 184 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 SHKBP1Q8TBC3 707 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 LRRC3BQ96PB8 259 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 C17orf75Q9HAS0 396 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 GTSE1Q9NYZ3 720 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 LARSQ9P2J5 1176 aaKnown RBP19.49■□□□□ 0.71
VCP-202ENST00000417448 FBXL5Q9UKA1 691 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 CITO14578 2027 aa19.49■□□□□ 0.71
VCP-202ENST00000417448 GCN1Q92616 2671 aaKnown RBP19.48■□□□□ 0.71
VCP-202ENST00000417448 PRR29P0C7W0 189 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 NOVA1P51513 510 aaKnown RBP19.48■□□□□ 0.71
VCP-202ENST00000417448 ASIC1P78348 528 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 FOXC1Q12948 553 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 ATF7IP2Q5U623 682 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 RNF43Q68DV7 783 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 IQCEQ6IPM2 695 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 CEP57L1Q8IYX8 460 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 GLIS3Q8NEA6 775 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 PAGE5Q96GU1 130 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 ZFYVE19Q96K21 471 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 ZNF512Q96ME7 567 aaPredicted RBP19.48■□□□□ 0.71
VCP-202ENST00000417448 UROC1Q96N76 676 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 ACO2Q99798 780 aaKnown RBP19.48■□□□□ 0.71
VCP-202ENST00000417448 ADAM33Q9BZ11 813 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 TNMDQ9H2S6 317 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 TMEM134Q9H6X4 195 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 ASAH2Q9NR71 780 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 LOC400499M0QZD8 3231 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 PHLPP2Q6ZVD8 1323 aa19.48■□□□□ 0.71
VCP-202ENST00000417448 NUP205Q92621 2012 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 SRRM3A6NNA2 597 aaPredicted RBP19.47■□□□□ 0.71
VCP-202ENST00000417448 SLFN14P0C7P3 912 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 HARSP12081 509 aaKnown RBP19.47■□□□□ 0.71
VCP-202ENST00000417448 CASP5P51878 434 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 ZNF252P-AS1Q0IIN9 211 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 MRPL58Q14197 206 aaKnown RBP19.47■□□□□ 0.71
VCP-202ENST00000417448 STXBP5Q5T5C0 1151 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 RALGPS2Q86X27 583 aaPredicted RBP19.47■□□□□ 0.71
VCP-202ENST00000417448 YAF2Q8IY57 180 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 GATA6Q92908 595 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 C7orf25Q9BPX7 421 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 ADPGKQ9BRR6 497 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 LRRC3Q9BY71 257 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 PCDHGA5Q9Y5G8 931 aa19.47■□□□□ 0.71
VCP-202ENST00000417448 FAM237AA0A1B0GTK4 181 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 TISP43B9A030 160 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 ZNF202O95125 648 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 OSTNP61366 133 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 KCNA1Q09470 495 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 SEZ6Q53EL9 994 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 TPGS2Q68CL5 300 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 TMC8Q8IU68 726 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 ELMOD1Q8N336 334 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 CEP120Q8N960 986 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 ZC3H10Q96K80 434 aaKnown RBP19.46■□□□□ 0.71
VCP-202ENST00000417448 MKNK1Q9BUB5 465 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 MRPL4Q9BYD3 311 aaKnown RBP19.46■□□□□ 0.71
VCP-202ENST00000417448 MRPL44Q9H9J2 332 aaKnown RBP19.46■□□□□ 0.71
VCP-202ENST00000417448 TBX20Q9UMR3 447 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 FREM2Q5SZK8 3169 aa19.46■□□□□ 0.71
VCP-202ENST00000417448 SMIM28A0A1B0GU29 152 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 A0A1W2PRU2 124 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 SYN3O14994 580 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 CCDC192P0DO97 292 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 STRN3Q13033 797 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 ZNF720Q7Z2F6 126 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 SYNPOQ8N3V7 929 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 LEMD2Q8NC56 503 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 E2F7Q96AV8 911 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 BICD1Q96G01 975 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 TCHPQ9BT92 498 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 EDEM2Q9BV94 578 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 HAPLN2Q9GZV7 340 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 VPS45Q9NRW7 570 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 POLR3BQ9NW08 1133 aaPredicted RBP19.45■□□□□ 0.7
VCP-202ENST00000417448 ANKFY1Q9P2R3 1169 aa19.45■□□□□ 0.7
VCP-202ENST00000417448 CCDC163A0A0D9SF12 145 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 FRMD3A2A2Y4 597 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 C4orf47A7E2U8 309 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms