RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 YBX3P16989 372 aaKnown RBP eCLIP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT4P19013 534 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GNAT2P19087 354 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RXRAP19793 462 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ITIH2P19823 946 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MAPK4P31152 587 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GRK4P32298 578 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PSMC2P35998 433 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ACAA2P42765 397 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PIP4K2AP48426 406 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNC1P48547 511 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CDK8P49336 464 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNJ10P78508 379 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 AMPD2Q01433 879 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GBE1Q04446 702 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RELQ04864 619 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NSUN2Q08J23 767 aaKnown RBP eCLIP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SMAD4Q13485 552 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RIPK1Q13546 671 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CAMK2DQ13557 499 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CUL2Q13617 745 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NFE2L1Q14494 772 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 INPP5AQ14642 412 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SEC23BQ15437 767 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 STK11Q15831 433 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CNGA3Q16281 694 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PRSS53Q2L4Q9 553 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GARNL3Q5VVW2 1013 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TPGS2Q68CL5 300 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TAF2Q6P1X5 1199 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KLHDC10Q6PID8 442 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 INTS8Q75QN2 995 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC80Q76M96 950 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MIGA2Q7L4E1 593 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNK18Q7Z418 384 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SESTD1Q86VW0 696 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SPATA2LQ8IUW3 424 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MCATQ8IVS2 390 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TUSC5Q8IXB3 177 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SIRT2Q8IXJ6 389 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ADGRG2Q8IZP9 1017 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 FBXO15Q8NCQ5 510 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SUPT20HQ8NEM7 779 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 OR6C4Q8NGE1 309 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GPBAR1Q8TDU6 330 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 HASPINQ8TF76 798 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SCFD2Q8WU76 684 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 STYXQ8WUJ0 223 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RIN2Q8WYP3 895 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNN1Q92952 543 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CYFIP2Q96F07 1278 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NEIL1Q96FI4 390 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TWNKQ96RR1 684 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 WDR24Q96S15 920 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ZIC5Q96T25 663 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ELF4Q99607 663 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PRPF18Q99633 342 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 HERC2P3Q9BVR0 1158 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PBX4Q9BYU1 374 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TRIM7Q9C029 511 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC7A5P2Q9GIP4 190 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 REXO4Q9GZR2 422 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ABCG8Q9H221 673 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TAOK3Q9H2K8 898 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 DPH5Q9H2P9 285 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NDST4Q9H3R1 872 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RNPEPQ9H4A4 650 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ARMT1Q9H993 441 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 FANCEQ9HB96 536 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GP6Q9HCN6 339 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 IL1RAPL2Q9NP60 686 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ACSS2Q9NR19 701 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SEMA3GQ9NS98 782 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ATAD3AQ9NVI7 634 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 GPATCH2Q9NW75 528 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CACNA2D2Q9NY47 1150 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TAS2R10Q9NYW0 307 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 EDARQ9UNE0 448 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 LIPT1Q9Y234 373 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PIN4Q9Y237 131 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 FCF1Q9Y324 198 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 SF3B6Q9Y3B4 125 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PSAT1Q9Y617 370 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 LMTK3Q96Q04 1460 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PRAMEF27A3QJZ7 478 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 KRBA1A5PL33 1030 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FIGNL2A6NMB9 653 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TBKBP1A7MCY6 615 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CLCA1A8K7I4 914 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 F8W8V4 182 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 H3BNC9 293 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 H3BUI4 141 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PSMD14O00487 310 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TSPAN4O14817 238 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PIP5K1BO14986 540 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MEFVO15553 781 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms