RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ZBED6P86452 979 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 KCNA10Q16322 511 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 CALCRLQ16602 461 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 TMEM119Q4V9L6 283 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 ASPRV1Q53RT3 343 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 BEND6Q5SZJ8 279 aaPredicted RBP7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 CENPPQ6IPU0 288 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 OTOP3Q7RTS5 596 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 FAM114A1Q8IWE2 563 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 CPA5Q8WXQ8 436 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 CALML4Q96GE6 196 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 KCNJ15Q99712 375 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 HAUS4Q9H6D7 363 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 AGPAT5Q9NUQ2 364 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 MYO6Q9UM54 1294 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 IRAK3Q9Y616 596 aa7.43□□□□□ -1.22
CSNK2A1-204ENST00000400227 NRXN2Q9P2S2 1712 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 ZNF646O15015 1829 aaPredicted RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 FRMPD2Q68DX3 1309 aaPredicted RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 MYO3BQ8WXR4 1341 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CTAGE15A4D2H0 777 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 EIF3CLB5ME19 914 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 KRIT1O00522 736 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 SLC37A4O43826 429 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 BUB1BO60566 1050 aaPredicted RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 MAFKO60675 156 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CTAGE8P0CG41 777 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 GNAT1P11488 350 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 OAS2P29728 719 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 HNRNPH3P31942 346 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CYP2C19P33261 490 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 MTIF2P46199 727 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 DDR1Q08345 913 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 SPIRE1Q08AE8 756 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 PDIA5Q14554 519 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 SMC1AQ14683 1233 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 HABP4Q5JVS0 413 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 PAPD7Q5XG87 772 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CYP4F22Q6NT55 531 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 DPP8Q6V1X1 898 aaPredicted RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 UNC13DQ70J99 1090 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CTAGE6Q86UF2 777 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 MIB1Q86YT6 1006 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CTAGE4Q8IX94 777 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 CCDC170Q8IYT3 715 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 PCDH19Q8TAB3 1148 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 PIP4K2CQ8TBX8 421 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 FBXO41Q8TF61 875 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 RAD54LQ92698 747 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 HPS3Q969F9 1004 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 COA7Q96BR5 231 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 EIF3CQ99613 913 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 SMOC1Q9H4F8 434 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 RIC8AQ9NPQ8 531 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 DDX4Q9NQI0 724 aaKnown RBP7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 GUCA1BQ9UMX6 200 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 SIK3Q9Y2K2 1263 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
CSNK2A1-204ENST00000400227 ABCB11O95342 1321 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 NPIPB6E9PJ23 425 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 H3BQF6 201 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 PES1O00541 588 aaKnown RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 TDP2O95551 362 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 ATF2P15336 505 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SHMT1P34896 483 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 CYLC1P35663 651 aaPredicted RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 LINC00310P59036 64 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 KRT83P78385 493 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 ZNF543Q08ER8 600 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SSPNQ14714 243 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 TMEM266Q2M3C6 531 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 VWA3BQ502W6 1294 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 FNDC3BQ53EP0 1204 aaKnown RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 FOXR2Q6PJQ5 311 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 CILP2Q8IUL8 1156 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SP8Q8IXZ3 490 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 TMEFF1Q8IYR6 380 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SYNPOQ8N3V7 929 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 GUF1Q8N442 669 aaKnown RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 NOA1Q8NC60 698 aaKnown RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 PHOSPHO1Q8TCT1 267 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 IQCDQ96DY2 449 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 MTMR8Q96EF0 704 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SCLYQ96I15 445 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 MAGEB10Q96LZ2 347 aaPredicted RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 NHEJ1Q9H9Q4 299 aaPredicted RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 JMJD4Q9H9V9 463 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 TRIM39Q9HCM9 518 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 SLC39A2Q9NP94 309 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 LRWD1Q9UFC0 647 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 CNOT6Q9ULM6 557 aaKnown RBP7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 TFR2Q9UP52 801 aa7.41□□□□□ -1.22
CSNK2A1-204ENST00000400227 COL11A2P13942 1736 aaPredicted RBP7.4□□□□□ -1.22
CSNK2A1-204ENST00000400227 TCRBV5S2A0A599 114 aa7.4□□□□□ -1.22
CSNK2A1-204ENST00000400227 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms