RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 KLHL20Q9Y2M5 609 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 PSMD11O00231 422 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 HMGB3O15347 200 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 GMFGO60234 142 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 SERPINA3P01011 423 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 OCLNQ16625 522 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 FAM45BPQ6NSW5 357 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 NCF1BA6NI72 391 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 NCF1CA8MVU1 366 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 PRMT3O60678 531 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 GGPS1O95749 300 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 NCF1P14598 390 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 WEE1P30291 646 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 MXI1P50539 228 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ITGADQ13349 1161 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ARSJQ5FYB0 599 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC38A7Q9NVC3 462 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LAD1O00515 517 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CKBP12277 381 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LBPP18428 481 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ETFBP38117 255 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 P3H2Q8IVL5 708 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CCDC185Q8N715 623 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 DDI1Q8WTU0 396 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 PIGKQ92643 395 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CFAP99D6REC4 459 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 SRP72O76094 671 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CDK17Q00537 523 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ATP1A4Q13733 1029 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 FAM45AQ8TCE6 357 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 FANCEQ9HB96 536 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 ZNF70Q9UC06 446 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 DBR1Q9UK59 544 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 RGL2O15211 777 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 PRKAB2O43741 272 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 FGAP02671 866 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 AVPR1AP37288 418 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TGFB2P61812 414 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TMEM132DQ14C87 1099 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 STYK1Q6J9G0 422 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 S100A13Q99584 98 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 MIR1-1HGQ9H1L0 117 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 DEFB129Q9H1M3 183 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 CCDC162PA2VCL2 907 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LRRC14BA6NHZ5 514 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 AIM2O14862 343 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 SGSM2O43147 1006 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LCA5LO95447 670 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 MSL3P1P0C860 447 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 VSNL1P62760 191 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 EFHC2Q5JST6 749 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 SARM1Q6SZW1 724 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 PIGOQ8TEQ8 1089 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 RAD21L1Q9H4I0 556 aa11.6□□□□□ -0.55
CACNA1C-217ENST00000399641 BTN3A3O00478 584 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 CHL1O00533 1208 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 TIMM44O43615 452 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 MFAP3LO75121 409 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 TNNI3P19429 210 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 ZNF438Q7Z4V0 828 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 RNF149Q8NC42 400 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 RNFT2Q96EX2 444 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 MRPL40Q9NQ50 206 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 SNX8Q9Y5X2 465 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 PNMA6EA0A0J9YXQ4 647 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 GPR182O15218 404 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 CPSF4O95639 269 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 ALOX15P16050 662 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 ARFIP2P53365 341 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 LRRC39Q96DD0 335 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 FAM213AQ9BRX8 229 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 MBL2P11226 248 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 PCNAP12004 261 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 GJA8P48165 433 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 EPHB3P54753 998 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC45A4Q5BKX6 768 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 NEK7Q8TDX7 302 aa11.59□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC9A6Q92581 669 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms