RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SDCBP2Q9H190 292 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 SLC24A3Q9HC58 644 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 SETD4Q9NVD3 440 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 F8VP50 259 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 PPFIA4O75335 1185 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 ECEL1O95672 775 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 VPS41P49754 854 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 GRIK4Q16099 956 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 KIZQ2M2Z5 673 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 ZNF667Q5HYK9 610 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 DENND1BQ6P3S1 775 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 DNAJC24Q6P3W2 148 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 DCUN1D2Q6PH85 259 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 CCDC25Q86WR0 208 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 RHOT1Q8IXI2 618 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 KIAA0319LQ8IZA0 1049 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 LINC01465Q8N7H1 131 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 TMEM35BQ8NCS4 154 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 TWNKQ96RR1 684 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 RNF19AQ9NV58 838 aa12.46□□□□□ -0.42
COL25A1-202ENST00000399127 SLC15A5A6NIM6 579 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 PODXLO00592 558 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 MAGEB2O15479 319 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 NEBLO76041 1014 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
COL25A1-202ENST00000399127 IRAK1P51617 712 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 GNGT1P63211 74 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 OGDHQ02218 1023 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 KRT17Q04695 432 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ZNF252P-AS1Q0IIN9 211 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 SLC10A6Q3KNW5 377 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 GIMAP7Q8NHV1 300 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 CCDC114Q96M63 670 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 TINF2Q9BSI4 451 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 CXCL16Q9H2A7 254 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 CYTH4Q9UIA0 394 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 TMEM191CA6NGB0 347 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ERLIN2O94905 339 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 IL18RAPO95256 599 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 SHBGP04278 402 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 MMP3P08254 477 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 KRT10P13645 584 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 NR1D1P20393 614 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 CYP2B6P20813 491 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
COL25A1-202ENST00000399127 GUCY1A3Q02108 690 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ADCY2Q08462 1091 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 IFFO1Q0D2I5 559 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ACVR2BQ13705 512 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 KAZNQ674X7 775 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 TXNRD3NBQ6F5E7 133 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ERICH1Q86X53 443 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 NFKBIZQ9BYH8 718 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ZFYVE28Q9HCC9 887 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 SLC5A4Q9NY91 659 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
COL25A1-202ENST00000399127 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 SMIM23A6NLE4 172 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 ZEB2O60315 1214 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 TSPAN1O60635 241 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 SHOX2O60902 331 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 CALB1P05937 261 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 MCF2P10911 925 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 FNTAP49354 379 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 KRT71Q3SY84 523 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 DUSP28Q4G0W2 176 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 PRUNE1Q86TP1 453 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 C12orf50Q8NA57 414 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 SMC1BQ8NDV3 1235 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 EPB41L4BQ9H329 900 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 DOCK3Q8IZD9 2030 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 PMS2P54278 862 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 RAD23BP54727 409 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 CRHR2Q13324 411 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 PTPN20Q4JDL3 420 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 EMID1Q96A84 441 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms