RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 NOCTQ9UK39 431 aaKnown RBP11.35□□□□□ -0.59
NUP98-205ENST00000397007 CYB561D2O14569 222 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 TNFRSF10BO14763 440 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 ENOSF1Q7L5Y1 443 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 TCEAL8Q8IYN2 117 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 BARX2Q9UMQ3 279 aaPredicted RBP11.35□□□□□ -0.59
NUP98-205ENST00000397007 DOCK6Q96HP0 2047 aa11.35□□□□□ -0.59
NUP98-205ENST00000397007 NRG2O14511 850 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 CDC25BP30305 580 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 MAGEA11P43364 429 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 NDUFV1P49821 464 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 UBXN6Q9BZV1 441 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 DPEP3Q9H4B8 488 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 GCNT4Q9P109 453 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 MYH10P35580 1976 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 CHD5Q8TDI0 1954 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 UCHL3P15374 230 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 CLCN1P35523 988 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 LHX1P48742 406 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 PRSS55Q6UWB4 352 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 SCML4Q8N228 414 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 SUSD6Q92537 303 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 PRG3Q9Y2Y8 225 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 F8VZ95 297 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 SEC24AO95486 1093 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 TBXAS1P24557 533 aaPredicted RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 PIK3CAP42336 1068 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 RNASELQ05823 741 aaKnown RBP11.34□□□□□ -0.59
NUP98-205ENST00000397007 SMARCB1Q12824 385 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 CCDC142Q17RM4 750 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 TPGS2Q68CL5 300 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 IRF2BP2Q7Z5L9 587 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 ZMIZ2Q8NF64 920 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 HASPINQ8TF76 798 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 MRFAP1L1Q96HT8 127 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
NUP98-205ENST00000397007 PAEPP09466 180 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 CACNA2D1P54289 1103 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.59
NUP98-205ENST00000397007 ROR1Q01973 937 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 MYO1EQ12965 1108 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 ARTNQ5T4W7 220 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 FAM171A1Q5VUB5 890 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 GBP6Q6ZN66 633 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 TMC8Q8IU68 726 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 VSTM4Q8IW00 320 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 FAM81BQ96LP2 452 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 NSUN3Q9H649 340 aaKnown RBP11.33□□□□□ -0.59
NUP98-205ENST00000397007 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.59
NUP98-205ENST00000397007 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 ATF2P15336 505 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 PRKCIP41743 596 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 DCAF17Q5H9S7 520 aaPredicted RBP11.33□□□□□ -0.6
NUP98-205ENST00000397007 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 APPL2Q8NEU8 664 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP98-205ENST00000397007 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 FHOD1Q9Y613 1164 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TGM5O43548 720 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TBX10O75333 385 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TADA2AO75478 443 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 GYPCP04921 128 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 CDH8P55286 799 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 EIF4EBP2Q13542 120 aaPredicted RBP11.33□□□□□ -0.6
NUP98-205ENST00000397007 EXOC3L4Q17RC7 722 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
NUP98-205ENST00000397007 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TMEM150AQ86TG1 271 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 FUKQ8N0W3 1084 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 TTC39CQ8N584 583 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
NUP98-205ENST00000397007 SPATA17Q96L03 361 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 HNRNPABQ99729 332 aaKnown RBP11.33□□□□□ -0.6
NUP98-205ENST00000397007 TTLL2Q9BWV7 592 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 STK33Q9BYT3 514 aa11.33□□□□□ -0.6
NUP98-205ENST00000397007 ATF6P18850 670 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 PSMD5Q16401 504 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 SNX30Q5VWJ9 437 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 Q7L0L9 218 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms