RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PCDHA6Q9UN73 950 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 CAB39Q9Y376 341 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 PCDHA8Q9Y5H6 950 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
NDE1-202ENST00000396355 FLT1P17948 1338 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ABLIM1O14639 778 aa8.83□□□□□ -1
NDE1-202ENST00000396355 AGTP01019 485 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PDGFRBP09619 1106 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ENDOUP21128 410 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 TCEA1P23193 301 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 MZF1P28698 734 aaPredicted RBP8.83□□□□□ -1
NDE1-202ENST00000396355 GTF2IP78347 998 aa8.83□□□□□ -1
NDE1-202ENST00000396355 SREBF2Q12772 1141 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TRIM25Q14258 630 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 LPCAT4Q643R3 524 aa8.83□□□□□ -1
NDE1-202ENST00000396355 DSTYKQ6XUX3 929 aa8.83□□□□□ -1
NDE1-202ENST00000396355 HELQQ8TDG4 1101 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PDCD6IPQ8WUM4 868 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 CDCA5Q96FF9 252 aa8.83□□□□□ -1
NDE1-202ENST00000396355 C9orf72Q96LT7 481 aa8.83□□□□□ -1
NDE1-202ENST00000396355 RUNDC3BQ96NL0 473 aa8.83□□□□□ -1
NDE1-202ENST00000396355 SLCO1B3Q9NPD5 702 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PCDHA4Q9UN74 947 aa8.83□□□□□ -1
NDE1-202ENST00000396355 CCDC195A0A1B0GUA6 201 aa8.83□□□□□ -1
NDE1-202ENST00000396355 GOLGA8CPA6NN73 597 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ATP2A1O14983 1001 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TRMUO75648 421 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 DLGAP3O95886 979 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PMLP29590 882 aa8.83□□□□□ -1
NDE1-202ENST00000396355 CDK7P50613 346 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ZYXQ15942 572 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 IQSEC1Q6DN90 963 aa8.83□□□□□ -1
NDE1-202ENST00000396355 CCDC103Q8IW40 242 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TTC16Q8NEE8 873 aa8.83□□□□□ -1
NDE1-202ENST00000396355 EHD1Q9H4M9 534 aa8.83□□□□□ -1
NDE1-202ENST00000396355 CCSER2Q9H7U1 834 aa8.83□□□□□ -1
NDE1-202ENST00000396355 MRPL40Q9NQ50 206 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 MKS1Q9NXB0 559 aa8.83□□□□□ -1
NDE1-202ENST00000396355 RNF186Q9NXI6 227 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PACSIN3Q9UKS6 424 aa8.83□□□□□ -1
NDE1-202ENST00000396355 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 AK5Q9Y6K8 562 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ROBO3Q96MS0 1386 aa8.83□□□□□ -1
NDE1-202ENST00000396355 H2AFZP0C0S5 128 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PRKACAP17612 351 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TCN1P20061 433 aaPredicted RBP8.83□□□□□ -1
NDE1-202ENST00000396355 KCNJ1P48048 391 aa8.83□□□□□ -1
NDE1-202ENST00000396355 SLC5A3P53794 718 aa8.83□□□□□ -1
NDE1-202ENST00000396355 PON2Q15165 354 aa8.83□□□□□ -1
NDE1-202ENST00000396355 WASHC2DQ5SRD0 308 aa8.83□□□□□ -1
NDE1-202ENST00000396355 LDLRAP1Q5SW96 308 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ARL6IP4Q66PJ3 421 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 H2AFVQ71UI9 128 aa8.83□□□□□ -1
NDE1-202ENST00000396355 ADSSL1Q8N142 457 aa8.83□□□□□ -1
NDE1-202ENST00000396355 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
NDE1-202ENST00000396355 FBXO25Q8TCJ0 367 aa8.83□□□□□ -1
NDE1-202ENST00000396355 COX4I2Q96KJ9 171 aa8.83□□□□□ -1
NDE1-202ENST00000396355 TUT1Q9H6E5 874 aaKnown RBP8.83□□□□□ -1
NDE1-202ENST00000396355 KCNQ5Q9NR82 932 aa8.83□□□□□ -1
NDE1-202ENST00000396355 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
NDE1-202ENST00000396355 DTNAQ9Y4J8 743 aa8.83□□□□□ -1
NDE1-202ENST00000396355 FADS3Q9Y5Q0 445 aa8.83□□□□□ -1
NDE1-202ENST00000396355 LGALS16A8MUM7 142 aa8.82□□□□□ -1
NDE1-202ENST00000396355 TSC22D2O75157 780 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PEX11AO75192 247 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PRLP01236 227 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PTPN4P29074 926 aa8.82□□□□□ -1
NDE1-202ENST00000396355 TPTEP56180 551 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SPIDRQ14159 915 aa8.82□□□□□ -1
NDE1-202ENST00000396355 CRY2Q49AN0 593 aa8.82□□□□□ -1
NDE1-202ENST00000396355 KLHL35Q6PF15 583 aa8.82□□□□□ -1
NDE1-202ENST00000396355 WDR59Q6PJI9 974 aa8.82□□□□□ -1
NDE1-202ENST00000396355 BTNL9Q6UXG8 535 aa8.82□□□□□ -1
NDE1-202ENST00000396355 ATG14Q6ZNE5 492 aa8.82□□□□□ -1
NDE1-202ENST00000396355 HAUS8Q9BT25 410 aa8.82□□□□□ -1
NDE1-202ENST00000396355 GLT8D2Q9H1C3 349 aa8.82□□□□□ -1
NDE1-202ENST00000396355 VPS33BQ9H267 617 aa8.82□□□□□ -1
NDE1-202ENST00000396355 CLRN2A0PK11 232 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SYCE1LA8MT33 242 aa8.82□□□□□ -1
NDE1-202ENST00000396355 KLRC1P26715 233 aa8.82□□□□□ -1
NDE1-202ENST00000396355 ZNF200P98182 395 aaPredicted RBP8.82□□□□□ -1
NDE1-202ENST00000396355 LMNB2Q03252 620 aa8.82□□□□□ -1
NDE1-202ENST00000396355 AP1B1Q10567 949 aa8.82□□□□□ -1
NDE1-202ENST00000396355 MESDQ14696 234 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PDK3Q15120 406 aa8.82□□□□□ -1
NDE1-202ENST00000396355 LRRC41Q15345 812 aa8.82□□□□□ -1
NDE1-202ENST00000396355 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SH3TC2Q8TF17 1288 aa8.82□□□□□ -1
NDE1-202ENST00000396355 ZNF333Q96JL9 665 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PLGRKTQ9HBL7 147 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PRKAG3Q9UGI9 489 aa8.82□□□□□ -1
NDE1-202ENST00000396355 PARP2Q9UGN5 583 aa8.82□□□□□ -1
NDE1-202ENST00000396355 DIS3Q9Y2L1 958 aaKnown RBP8.82□□□□□ -1
NDE1-202ENST00000396355 H7C0C1 242 aa8.82□□□□□ -1
NDE1-202ENST00000396355 J3QRK9 145 aa8.82□□□□□ -1
NDE1-202ENST00000396355 TSPAN4O14817 238 aa8.82□□□□□ -1
NDE1-202ENST00000396355 GAS7O60861 476 aa8.82□□□□□ -1
NDE1-202ENST00000396355 BAG3O95817 575 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SPATA31D3P0C874 917 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms