RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 VPS51Q9UID3 782 aa10.17□□□□□ -0.78
CDRT1-204ENST00000395906 GNPTGQ9UJJ9 305 aa10.17□□□□□ -0.78
CDRT1-204ENST00000395906 BCORQ6W2J9 1755 aa10.17□□□□□ -0.78
CDRT1-204ENST00000395906 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 KLRF2D3W0D1 207 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 ZBTB43O43298 467 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 IDH3BO43837 385 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PEX1O43933 1283 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 SULT1C4O75897 302 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 RXRAP19793 462 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LMNB1P20700 586 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 FGFR2P21802 821 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 CCNE1P24864 410 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 COPB2P35606 906 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 IRX4P78413 519 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 KRT76Q01546 638 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 ATP1A4Q13733 1029 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PCSK7Q16549 785 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 Q3C1V9 767 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 EGFLAMQ63HQ2 1017 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 C4orf22Q6V702 233 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 EPM2AIP1Q7L775 607 aaPredicted RBP10.16□□□□□ -0.78
CDRT1-204ENST00000395906 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PEX26Q7Z412 305 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 TTC30BQ8N4P2 665 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LSMEM1Q8N8F7 131 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 HCAR2Q8TDS4 363 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 GDPD5Q8WTR4 605 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 RPGRQ92834 1020 aaKnown RBP10.16□□□□□ -0.78
CDRT1-204ENST00000395906 CDK5RAP3Q96JB5 506 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 C8orf48Q96LL4 319 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 IMPG2Q9BZV3 1241 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 C10orf88Q9H8K7 445 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 C17orf75Q9HAS0 396 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 S100A14Q9HCY8 104 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 SLCO1B3Q9NPD5 702 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 TYW1Q9NV66 732 aaKnown RBP10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PCDHGA11Q9Y5H2 935 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 MROH5Q6ZUA9 1318 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 TTLL1O95922 423 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 FGGP02679 453 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PON1P27169 355 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PMLP29590 882 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 SLC5A3P53794 718 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 NCKAP1LP55160 1127 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 HSPA14Q0VDF9 509 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 STK4Q13043 487 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 MAPK7Q13164 816 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 NCOA4Q13772 614 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PDK4Q16654 411 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LRRC36Q1X8D7 754 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 TIGD2Q4W5G0 525 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 BTBD8Q5XKL5 378 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LVRNQ6Q4G3 990 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LPCAT2Q7L5N7 544 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 GIMAP8Q8ND71 665 aaPredicted RBP10.16□□□□□ -0.78
CDRT1-204ENST00000395906 EXD1Q8NHP7 514 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 P2RX5Q93086 422 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 PACSIN1Q9BY11 444 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 OSBPL8Q9BZF1 889 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 GLT8D2Q9H1C3 349 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 GPR108Q9NPR9 543 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 HACD3Q9P035 362 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 LGALS13Q9UHV8 139 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDRT1-204ENST00000395906 SCINQ9Y6U3 715 aa10.16□□□□□ -0.78
CDRT1-204ENST00000395906 UBE2Q2LH0YL09 131 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 AP3B1O00203 1094 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 TCEA3O75764 348 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 PRKCIP41743 596 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 STAT2P52630 851 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 CREB5Q02930 508 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 SPARCL1Q14515 664 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 COL19A1Q14993 1142 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 TLR1Q15399 786 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 RGS21Q2M5E4 152 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF568Q3ZCX4 644 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 LPCAT4Q643R3 524 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 TMPRSS6Q8IU80 811 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 SLC38A6Q8IZM9 456 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 HES6Q96HZ4 224 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 PUS7LQ9H0K6 701 aaKnown RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 CCDC177Q9NQR7 707 aaPredicted RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 OLFML3Q9NRN5 406 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 FAM217BQ9NTX9 383 aaPredicted RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 DIS3Q9Y2L1 958 aaKnown RBP10.15□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.78
CDRT1-204ENST00000395906 PODXLO00592 558 aa10.15□□□□□ -0.79
CDRT1-204ENST00000395906 TMCC2O75069 709 aa10.15□□□□□ -0.79
CDRT1-204ENST00000395906 SIN3BO75182 1162 aa10.15□□□□□ -0.79
CDRT1-204ENST00000395906 TM7SF2O76062 418 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms