RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 THAP11Q96EK4 314 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 CLK4Q9HAZ1 481 aaKnown RBP13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 THEGQ9P2T0 379 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 AJAP1Q9UKB5 411 aaPredicted RBP13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 PACSIN3Q9UKS6 424 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 CD48P09326 243 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 POLR2MP0CAP2 368 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 KRT17Q04695 432 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 RALGPS1Q5JS13 557 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 CLVS1Q8IUQ0 354 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 FAR2Q96K12 515 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 KCNK13Q9HB14 408 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 FAM205AQ6ZU69 1335 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 CDK9P50750 372 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 PDIA6Q15084 440 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 EDRF1Q3B7T1 1238 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 SPDYAQ5MJ70 313 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 MARVELD2Q8N4S9 558 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 ATG4AQ8WYN0 398 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 FAM118BQ9BPY3 351 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 TUBB6Q9BUF5 446 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 GANQ9H2C0 597 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 DSEQ9UL01 958 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 COL4A3BPQ9Y5P4 624 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 SNX9Q9Y5X1 595 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
SLC28A1-203ENST00000394573 A0A088AWK7 358 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CYTH3O43739 400 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 KLHL41O60662 606 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CSPG5O95196 566 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 AP3M2P53677 418 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CDH15P55291 814 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 RPS3AP61247 264 aaKnown RBP13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CCNIQ14094 377 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 DTX3Q8N9I9 347 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 OR7G1Q8NGA0 311 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 BORCS5Q969J3 196 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 LGALS13Q9UHV8 139 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CORINQ9Y5Q5 1042 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CHD4Q14839 1912 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CCDC162PA2VCL2 907 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 ZNF12P17014 697 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CD247P20963 164 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 GPC3P51654 580 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 MAPK10P53779 464 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 SIGIRRQ6IA17 410 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 KLHL3Q9UH77 587 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 PCYOX1Q9UHG3 505 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 ZNF536O15090 1300 aa13.13□□□□□ -0.31
SLC28A1-203ENST00000394573 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 TTC34A8MYJ7 566 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 ALDH1A3P47895 512 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 ALDH18A1P54886 795 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 CTBSQ01459 385 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 GNA12Q03113 381 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 BNIP3Q12983 259 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 APOFQ13790 326 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 CCDC58Q4VC31 144 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 PRPF39Q86UA1 669 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 CLIP4Q8N3C7 705 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 CTRCQ99895 268 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 TSSK1BQ9BXA7 367 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 GPAMQ9HCL2 828 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 MARCOQ9UEW3 520 aaPredicted RBP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 COG5Q9UP83 839 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 SIN3BO75182 1162 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 KITP10721 976 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 KRT4P19013 534 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 ENPP1P22413 925 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 BDNFP23560 247 aa13.12□□□□□ -0.31
SLC28A1-203ENST00000394573 NUP107P57740 925 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms