RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 TAF1DQ9H5J8 278 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 DNAAF2Q9NVR5 837 aaKnown RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 GCNT4Q9P109 453 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PRR12Q9ULL5 1215 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 DUSP12Q9UNI6 340 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 POLA1P09884 1462 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 MEIS1O00470 390 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PRPSAP2O60256 369 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 KPNA6O60684 536 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 CYP7B1O75881 506 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 GSTM1P09488 218 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 NCF4Q15080 339 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 TOMM20Q15388 145 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 MAPRE2Q15555 327 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 KCNA10Q16322 511 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 DDB1Q16531 1140 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 KLHL38Q2WGJ6 581 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PGS1Q32NB8 556 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 GPR107Q5VW38 600 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 RNF219Q5W0B1 726 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 GPR139Q6DWJ6 353 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PRR5LQ6MZQ0 368 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ZCCHC12Q6PEW1 402 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 MACC1Q6ZN28 852 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 RHPN2Q8IUC4 686 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PDIK1LQ8N165 341 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 RNF148Q8N7C7 305 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 DEPTORQ8TB45 409 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 JADE3Q92613 823 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 SNF8Q96H20 258 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 CEP295NLQ96MC4 621 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 FARSBQ9NSD9 589 aaKnown RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 ATXN10Q9UBB4 475 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 SLC12A6Q9UHW9 1150 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ZNF223Q9UK11 482 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 ZNF451Q9Y4E5 1061 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ABCC4O15439 1325 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 A0A0B4J269 797 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SMIM31A0A1B0GVY4 71 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ARHGEF33A8MVX0 844 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SULT1B1O43704 296 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GNA14O95837 355 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CFBP00751 764 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZNF24P17028 368 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PSMA4P25789 261 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 WEE1P30291 646 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ETV5P41161 510 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NCKAP1LP55160 1127 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NAA20P61599 178 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PRKG2Q13237 762 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TUBB3Q13509 450 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TUBA3CQ13748 450 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MTFR1Q15390 333 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GALNTL6Q49A17 601 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.4□□□□□ -1.872e-12■■■■■ 67.6
PHF3-202ENST00000393387 HIPK1Q86Z02 1210 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SCUBE1Q8IWY4 988 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CNBD1Q8NA66 436 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 OSBP2Q969R2 916 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 RMND5BQ96G75 393 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 BBS4Q96RK4 519 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 KCNK16Q96T55 309 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 FSD1LQ9BXM9 530 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SENP6Q9GZR1 1112 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 XKR8Q9H6D3 395 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TUBG2Q9NRH3 451 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 KLHL8Q9P2G9 620 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 NCF1BA6NI72 391 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 A8MV72 311 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 NCF1CA8MVU1 366 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 DFFAO00273 331 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PRODHO43272 600 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SSX5O60225 188 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 HS6ST1O60243 411 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TSPAN1O60635 241 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CBFA2T3O75081 653 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NFICP08651 508 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NCF1P14598 390 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 TYK2P29597 1187 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ARL4AP40617 200 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 USP14P54578 494 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CDKL1Q00532 357 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SSX2Q16385 188 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CCDC153Q494R4 210 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SPANXN2Q5MJ10 180 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 RNF220Q5VTB9 566 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 IZUMO3Q5VZ72 239 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CWF19L1Q69YN2 538 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 KCNK18Q7Z418 384 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 FOXRED2Q8IWF2 684 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CCDC185Q8N715 623 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SNX31Q8N9S9 440 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SHCBP1Q8NEM2 672 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 KBTBD7Q8WVZ9 684 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 IFT43Q96FT9 208 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZIM3Q96PE6 472 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GAL3ST1Q99999 423 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CARD14Q9BXL6 1004 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MRPL9Q9BYD2 267 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 EML4Q9HC35 981 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms