RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 C5orf42Q9H799 3197 aa20.76■□□□□ 0.91
GTF3A-201ENST00000381140 LRRN2O75325 713 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 GNA14O95837 355 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 LRG1P02750 347 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 PDGFRBP09619 1106 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 LHX1P48742 406 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 CBWD6Q4V339 395 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 CBWD3Q5JTY5 395 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 CBWD5Q5RIA9 395 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 LRRTM3Q86VH5 581 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 ATAD1Q8NBU5 361 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 CCDC150Q8NCX0 1101 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 CMASQ8NFW8 434 aaPredicted RBP20.75■□□□□ 0.91
GTF3A-201ENST00000381140 OR6B3Q8NGW1 331 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 SUSD6Q92537 303 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 SLC35C1Q96A29 364 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 ZNF707Q96C28 371 aaPredicted RBP20.75■□□□□ 0.91
GTF3A-201ENST00000381140 PRKD2Q9BZL6 878 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 POMKQ9H5K3 350 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 SLC27A5Q9Y2P5 690 aa20.75■□□□□ 0.91
GTF3A-201ENST00000381140 MTMR11A4FU01 709 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 ASS1P00966 412 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 P4HA1P13674 534 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 WARSP23381 471 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 LMO2P25791 158 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 ERCC5P28715 1186 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 PCSK1P29120 753 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 CDH8P55286 799 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 PSMC1P62191 440 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 NOP14P78316 857 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 DUSP4Q13115 394 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 TCEAL8Q8IYN2 117 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 DCP1BQ8IZD4 617 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 TTC9BQ8N6N2 239 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 FBXL13Q8NEE6 735 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 TAF4BQ92750 862 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 SEMA4DQ92854 862 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 CNOT6LQ96LI5 555 aaKnown RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 VRTNQ9H8Y1 702 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 ANO10Q9NW15 660 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 ABI2Q9NYB9 513 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-201ENST00000381140 INSL5Q9Y5Q6 135 aa20.74■□□□□ 0.91
GTF3A-201ENST00000381140 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 GABRDO14764 452 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 ATP2C2O75185 946 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 XYLBO75191 536 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 VNN2O95498 520 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 CAVIN2O95810 425 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 HNRNPA1P09651 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
GTF3A-201ENST00000381140 GNL1P36915 607 aaPredicted RBP20.73■□□□□ 0.91
GTF3A-201ENST00000381140 CCDC142Q17RM4 750 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 UVSSAQ2YD98 709 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 HSP90AA4PQ58FG1 418 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 INTS6LQ5JSJ4 861 aaKnown RBP20.73■□□□□ 0.91
GTF3A-201ENST00000381140 LIMS2Q7Z4I7 341 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 SPATA18Q8TC71 538 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 RPGRIP1Q96KN7 1286 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 NECTIN4Q96NY8 510 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 SYT15Q9BQS2 421 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 ACBD6Q9BR61 282 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 SDCBP2Q9H190 292 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 CRISPLD1Q9H336 500 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 TMLHEQ9NVH6 421 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 PTPRDP23468 1912 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 NOTCH4Q99466 2003 aa20.73■□□□□ 0.91
GTF3A-201ENST00000381140 SOAT2O75908 522 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 FMO5P49326 533 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 MCCD1P59942 119 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 TWF1Q12792 350 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 C11orf57Q6ZUT1 292 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 GRASPQ7Z6J2 395 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 UHRF1Q96T88 793 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 SEPT5Q99719 369 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 APOBEC3GQ9HC16 384 aaKnown RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 RAB20Q9NX57 234 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 GTF3C4Q9UKN8 822 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 YIPF1Q9Y548 306 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 A8MXQ7 604 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 TACC1O75410 805 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 SSTR3P32745 418 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 MTIF2P46199 727 aaKnown RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 NTHL1P78549 312 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 MGAT5BQ3V5L5 792 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 WDR44Q5JSH3 913 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 TRIM59Q8IWR1 403 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 PHF7Q9BWX1 381 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-201ENST00000381140 NIF3L1Q9GZT8 377 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 HCFC1R1Q9NWW0 138 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 CDH9Q9ULB4 789 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 MAFFQ9ULX9 164 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 NME7Q9Y5B8 376 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 PCDHB5Q9Y5E4 795 aa20.72■□□□□ 0.91
GTF3A-201ENST00000381140 MYBPHLA2RUH7 354 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 HOXA9P31269 272 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 ASPAP45381 313 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 MARSP56192 900 aaKnown RBP20.71■□□□□ 0.91
GTF3A-201ENST00000381140 LRMPQ12912 555 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 ADHFE1Q8IWW8 467 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 LPIN3Q9BQK8 851 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms