RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 DENND1BQ6P3S1 775 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 DNAJC24Q6P3W2 148 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 NOTUMQ6P988 496 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 LRIG3Q6UXM1 1119 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 ERICH1Q86X53 443 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 SNX27Q96L92 541 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 TXLNGYQ9BZA5 131 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 ELOVL4Q9GZR5 314 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 AGAP1Q9UPQ3 857 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 TRIP12Q14669 1992 aaPredicted RBP20.38■□□□□ 0.85
GMDS-201ENST00000380805 CDH8P55286 799 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 RPL7AP62424 266 aaKnown RBP20.38■□□□□ 0.85
GMDS-201ENST00000380805 PTPN20Q4JDL3 420 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 RUFY4Q6ZNE9 571 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 CATSPER4Q7RTX7 472 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 TMC3Q7Z5M5 1100 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 TMEM176AQ96HP8 235 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 TWNKQ96RR1 684 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
GMDS-201ENST00000380805 FAM49AQ9H0Q0 323 aaPredicted RBP20.38■□□□□ 0.85
GMDS-201ENST00000380805 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.38■□□□□ 0.85
GMDS-201ENST00000380805 NPTXRO95502 500 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 VDRP11473 427 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 FGFR4P22455 802 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 MTMR3Q13615 1198 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 PIGHQ14442 188 aaPredicted RBP20.37■□□□□ 0.85
GMDS-201ENST00000380805 ALKAL1Q6UXT8 129 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 FNIP1Q8TF40 1166 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 RUFY1Q96T51 708 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 DPH5Q9H2P9 285 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 FAM204AQ9H8W3 233 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 CDHR5Q9HBB8 845 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 SAGE1Q9NXZ1 904 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 GRHL1Q9NZI5 618 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 CNTN3Q9P232 1028 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 WDR35Q9P2L0 1181 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 KIAA1257Q9ULG3 409 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 BARX2Q9UMQ3 279 aaPredicted RBP20.37■□□□□ 0.85
GMDS-201ENST00000380805 SCN1AP35498 2009 aa20.37■□□□□ 0.85
GMDS-201ENST00000380805 PPFIA2O75334 1257 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 HMGCRP04035 888 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 CD19P15391 556 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 CYP2B6P20813 491 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 GABRB2P47870 512 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 GYS2P54840 703 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 UAP1Q16222 522 aaPredicted RBP20.36■□□□□ 0.85
GMDS-201ENST00000380805 CNGA2Q16280 664 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 ZDHHC24Q6UX98 284 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 TMEM130Q8N3G9 435 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 GOLGA6L1Q8N7Z2 621 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 LENG1Q96BZ8 264 aaPredicted RBP20.36■□□□□ 0.85
GMDS-201ENST00000380805 KIF12Q96FN5 646 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 OSMRQ99650 979 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 HERPUD2Q9BSE4 406 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 BEGAINQ9BUH8 593 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 AP5M1Q9H0R1 490 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 HOMER3Q9NSC5 361 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 PARP2Q9UGN5 583 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 HMGXB4Q9UGU5 601 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 CYTH4Q9UIA0 394 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 SIGLEC16A6NMB1 481 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 O00370 1275 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 CTGFP29279 349 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 PTPN7P35236 360 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 HSD17B3P37058 310 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 CAP1Q01518 475 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 OGDHQ02218 1023 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 SGO2Q562F6 1265 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 SYDE1Q6ZW31 735 aaPredicted RBP20.36■□□□□ 0.85
GMDS-201ENST00000380805 LRRC52Q8N7C0 313 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 MCEEQ96PE7 176 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 FMO2Q99518 471 aa20.36■□□□□ 0.85
GMDS-201ENST00000380805 SCN10AQ9Y5Y9 1956 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 H0YGN5 161 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 GJB6O95452 261 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 TMEM62Q0P6H9 643 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 SNX17Q15036 470 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 NME8Q8N427 588 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 EIF2AQ9BY44 585 aaKnown RBP20.35■□□□□ 0.85
GMDS-201ENST00000380805 NFS1Q9Y697 457 aa20.35■□□□□ 0.85
GMDS-201ENST00000380805 TNPO2O14787 897 aaKnown RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 ECEL1O95672 775 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 FLT3P36888 993 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 IRX5P78411 483 aaPredicted RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 PURAQ00577 322 aaKnown RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 MYO1EQ12965 1108 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 ZNF268Q14587 947 aaPredicted RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 XKR4Q5GH76 650 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 DAB2IPQ5VWQ8 1189 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 POLNQ7Z5Q5 900 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 CCDC105Q8IYK2 499 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 DNAJB3Q8WWF6 145 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 RBM41Q96IZ5 413 aaKnown RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 ZMAT2Q96NC0 199 aaKnown RBP20.34■□□□□ 0.85
GMDS-201ENST00000380805 OSBPL8Q9BZF1 889 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 ARHGAP39Q9C0H5 1083 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 SNTG2Q9NY99 539 aa20.34■□□□□ 0.85
GMDS-201ENST00000380805 GOLGA6CA6NDK9 693 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms