RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PGRMC1O00264 195 aaKnown RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CCRL2O00421 344 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CIB2O75838 187 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CTDSPL2Q05D32 466 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 HSPA14Q0VDF9 509 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 NCOA4Q13772 614 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 EPHA7Q15375 998 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PTPROQ16827 1216 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TRIM16LQ309B1 348 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ZNF829Q3KNS6 432 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 LPCAT4Q643R3 524 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 NANOGP8Q6NSW7 305 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DTHD1Q6ZMT9 781 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TAS2R42Q7RTR8 314 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CYP2U1Q7Z449 544 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 NET1Q7Z628 596 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ATP6V0D2Q8N8Y2 350 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SPATA5Q8NB90 893 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SNX29Q8TEQ0 813 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DHRS9Q9BPW9 319 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PHTF1Q9UMS5 762 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 STARD13Q9Y3M8 1113 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CCDC188H7C350 402 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SIN3BO75182 1162 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PRDM1O75626 825 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SRGNP10124 158 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ITGA4P13612 1032 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 NR1H2P55055 460 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SCARF1Q14162 830 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CLUL1Q15846 466 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 INSCQ1MX18 579 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 IGSF11Q5DX21 431 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 RILPL1Q5EBL4 403 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DGLUCYQ7Z3D6 616 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 RALGPS2Q86X27 583 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CRAMP1Q96RY5 1269 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DCUN1D5Q9BTE7 237 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PHF20Q9BVI0 1012 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TRIM55Q9BYV6 548 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 APPL1Q9UKG1 709 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TRIM75PA6NK02 468 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CENPBD1B2RD01 187 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 BHMG1C9JSJ3 638 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 BUD23O43709 281 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 APBA3O96018 575 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 NAGAP17050 411 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 FGFR4P22455 802 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 PON1P27169 355 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 ATP5DP30049 168 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 FOXN2P32314 431 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CIITAP33076 1130 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 HNRNPFP52597 415 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 HIRAP54198 1017 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 DPYSQ14117 519 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 UBE4AQ14139 1066 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 PSMD6Q15008 389 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 LONRF1Q17RB8 773 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 HERC4Q5GLZ8 1057 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 UBAP2Q5T6F2 1119 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 IYDQ6PHW0 289 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 FAM196AQ6ZSG2 479 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CLNKQ7Z7G1 428 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 ELMOD2Q8IZ81 293 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 BBOF1Q8ND07 529 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 SLITRK6Q9H5Y7 841 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 TMEM206Q9H813 350 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CAAP1Q9H8G2 361 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 RIC8AQ9NPQ8 531 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 C8orf4Q9NR00 106 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 NOC2LQ9Y3T9 749 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 ANGPTL3Q9Y5C1 460 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 COMMD10Q9Y6G5 202 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MYOCOSA0A1B0GUC4 107 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 FOXO6A8MYZ6 492 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CAPN1P07384 714 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 PMLP29590 882 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 KRT2P35908 639 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MRPS9P82933 396 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CDK18Q07002 472 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 COX10Q12887 443 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MPP2Q14168 576 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 GNA13Q14344 377 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 EFTUD2Q15029 972 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■■■ 26.8
PTPRA-204ENST00000380393 KYNUQ16719 465 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 EXOC3L4Q17RC7 722 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 FBXL19Q6PCT2 694 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 DEPDC4Q8N2C3 294 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 MTMR12Q9C0I1 747 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 UBN1Q9NPG3 1134 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 ARL8BQ9NVJ2 186 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 UCKL1Q9NWZ5 548 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 HERC5Q9UII4 1024 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 CNOT7Q9UIV1 285 aaKnown RBP9.81□□□□□ -0.84
PTPRA-204ENST00000380393 EMSYQ7Z589 1322 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 UBR2Q8IWV8 1755 aa9.81□□□□□ -0.84
PTPRA-204ENST00000380393 BRWD3Q6RI45 1802 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms