RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 TRABD2AQ86V40 505 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 ZNF677Q86XU0 584 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 DENND1AQ8TEH3 1009 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 TRIM11Q96F44 468 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 FDX1P10109 184 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 BPIFB4P59827 614 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 CCNG2Q16589 344 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 RNF220Q5VTB9 566 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 C10orf82Q8WW14 230 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 ZNF333Q96JL9 665 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 ZFP69BQ9UJL9 534 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 RPL26L1Q9UNX3 145 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 C4BPAP04003 597 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 NR3C2P08235 984 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 PIK3CAP42336 1068 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 LIG4P49917 911 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 NLRP11P59045 1033 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 MAMLD1Q13495 774 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 PDK4Q16654 411 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 ZACNQ401N2 412 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 VSIG10LQ86VR7 867 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 CCDC89Q8N998 374 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 UCMAQ8WVF2 138 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 FAM136AQ96C01 138 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 TRABDQ9H4I3 376 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 PDLIM7Q9NR12 457 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 KLHL11Q9NVR0 708 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 GRID1Q9ULK0 1009 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 PTPRJQ12913 1337 aa17.5■□□□□ 0.39
PCDHA1-201ENST00000378133 EXTL3O43909 919 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 DGAT1O75907 488 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 VHLP40337 213 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 NR1H3Q13133 447 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 LIN9Q5TKA1 542 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 IRGCQ6NXR0 463 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PCDHB4Q9Y5E5 795 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ZBED4O75132 1171 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RTN3O95197 1032 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 KRT15P19012 456 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RPA3P35244 121 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 MAGEA4P43358 317 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PTP4A2Q12974 167 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 MTMR2Q13614 643 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 TBC1D25Q3MII6 688 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 BBOF1Q8ND07 529 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RBM15Q96T37 977 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 POLR3FQ9H1D9 316 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 APOBEC3GQ9HC16 384 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 WDR35Q9P2L0 1181 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ARHGAP28Q9P2N2 729 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 POC1B-GALNT4F8VUJ3 575 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 TLR3O15455 904 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PRPF4O43172 522 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PSTPIP1O43586 416 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 VNN1O95497 513 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 KAZNQ674X7 775 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RFWD3Q6PCD5 774 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 C4orf50Q6ZRC1 276 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 NLRP9Q7RTR0 991 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 MTDHQ86UE4 582 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 C4orf33Q8N1A6 199 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 SMC6Q96SB8 1091 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 TLE6Q9H808 572 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 SCOCQ9UIL1 159 aa17.49■□□□□ 0.39
PCDHA1-201ENST00000378133 PI4K2BG5E9Z4 385 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 KRT10P13645 584 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 CCND2P30279 289 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 GNA15P30679 374 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 NOMO3P69849 1222 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 PSMD6Q15008 389 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 P3H1Q32P28 736 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 SLC45A4Q5BKX6 768 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 ZFYVE27Q5T4F4 411 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 RELL1Q8IUW5 271 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 ABRAQ8N0Z2 381 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms