RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MROH8Q9H579 483 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SLITRK6Q9H5Y7 841 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 ZFYVE28Q9HCC9 887 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TSPAN16Q9UKR8 245 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 PASKQ96RG2 1323 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 XIRP2A4UGR9 3374 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CD52P31358 61 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CRADDP78560 199 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 PPIL2Q13356 520 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MFSD7Q6UXD7 560 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TFAP2BQ92481 460 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 LRRC45Q96CN5 670 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 JPH2Q9BR39 696 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MRPL47Q9HD33 250 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TRMT13Q9NUP7 481 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 IL1RAPL1Q9NZN1 696 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 AIPL1Q9NZN9 384 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 R3HDM2Q9Y2K5 976 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MYH7BA7E2Y1 1941 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 A0A1W2PQJ5 194 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 EBAG9O00559 213 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SDC4P31431 198 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 BRCC3P46736 316 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TAS2R40P59535 323 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 ALCAMQ13740 583 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 RAB6CQ53S08 254 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SLC2A14Q8TDB8 520 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CELF6Q96J87 481 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TWNKQ96RR1 684 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MKNK1Q9BUB5 465 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SLC13A1Q9BZW2 595 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 RAB6CQ9H0N0 254 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SIX2Q9NPC8 291 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TXNDC16Q9P2K2 825 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TRIM17Q9Y577 477 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MAST2Q6P0Q8 1798 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ANO9A1A5B4 782 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 KCNK1O00180 336 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ATP2A1O14983 1001 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ATP9BO43861 1147 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 NPM3O75607 178 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SOAT2O75908 522 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 IQCF3P0C7M6 154 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 RARAP10276 462 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 KITP10721 976 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 CPB1P15086 417 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 H2AFXP16104 143 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 PRKCZQ05513 592 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SGSM1Q2NKQ1 1148 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 OLFML2BQ68BL8 750 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 NT5DC3Q86UY8 548 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SEPT5Q99719 369 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ABHD16BQ9H3Z7 469 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 DPEP3Q9H4B8 488 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ACSS2Q9NR19 701 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 CHMP2BQ9UQN3 213 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 BRWD1Q9NSI6 2320 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 COL4A5P29400 1685 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 ZBED1O96006 694 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 CD48P09326 243 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SMIM10L2AP0DMW4 78 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SMIM10L2BP0DMW5 78 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 PDIA2Q13087 525 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 FAM133BQ5BKY9 247 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 HYIQ5T013 277 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 BEST2Q8NFU1 509 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 CLEC4CQ8WTT0 213 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 PTPN18Q99952 460 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 GABRQQ9UN88 632 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 EXOC1LA0A1B0GW35 172 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MYADML2A6NDP7 307 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 KCNN4O15554 427 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 NR1D1P20393 614 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 GNL1P36915 607 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SEPT6Q14141 434 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SPARCL1Q14515 664 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MFSD10Q14728 455 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MDH1BQ5I0G3 518 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MEI1Q5TIA1 1274 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 WSCD1Q658N2 575 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms