RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 CCHCR1Q8TD31 782 aa18.58■□□□□ 0.57
TRAF3IP1-201ENST00000373327 HELQQ8TDG4 1101 aa18.58■□□□□ 0.57
TRAF3IP1-201ENST00000373327 CYTH2Q99418 400 aa18.58■□□□□ 0.57
TRAF3IP1-201ENST00000373327 NINJ2Q9NZG7 142 aa18.58■□□□□ 0.57
TRAF3IP1-201ENST00000373327 NCANO14594 1321 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 KLRG2A4D1S0 409 aaPredicted RBP18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 IGF2BP3O00425 579 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TRAPPC3O43617 180 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CYP2C8P10632 490 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CA8P35219 290 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MYBPC2Q14324 1141 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MXD4Q14582 209 aaPredicted RBP18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 GEN1Q17RS7 908 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 NXNQ6DKJ4 435 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ATP11CQ8NB49 1132 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 DEPDC1BQ8WUY9 529 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PPP1R36Q96LQ0 422 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ACAP3Q96P50 834 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 C2orf40Q9H1Z8 148 aa18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 FNDC3AQ9Y2H6 1198 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TXNDC9O14530 226 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CCNA1P78396 465 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TMEM132DQ14C87 1099 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PCGF5Q86SE9 256 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PDCD7Q8N8D1 485 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ABCF3Q9NUQ8 709 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MAPK13O15264 365 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 GH1P01241 217 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 AP1B1Q10567 949 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TREML2Q5T2D2 321 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SH3GL2Q99962 352 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TARSP26639 723 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 GCNT1Q02742 428 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ITKQ08881 620 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SPOCD1Q6ZMY3 1216 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 DHX15O43143 795 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SLC8A1P32418 973 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 RFC1P35251 1148 aaPredicted RBP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 FSTL1Q12841 308 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 AUHQ13825 339 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CAPSQ13938 189 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PSMD6Q15008 389 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 IER5Q5VY09 327 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SCYL1Q96KG9 808 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 XPNPEP1Q9NQW7 623 aa18.57■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 IRF6O14896 467 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ALDH5A1P51649 535 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SNX16P57768 344 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MAMLD1Q13495 774 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 VGLL4Q14135 290 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 EEF1DP3Q658K8 133 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CYB5D1Q6P9G0 228 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CLMNQ96JQ2 1002 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 HES2Q9Y543 173 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 RASSF2P50749 326 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PIGHQ14442 188 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SDCCAG8Q86SQ7 713 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SIX6OS1Q8N1H7 587 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PPFIBP2Q8ND30 876 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ZFP69BQ9UJL9 534 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CES2O00748 559 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ZNF536O15090 1300 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CTSHP09668 335 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TFDP2Q14188 446 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PKN2Q16513 984 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 RAPH1Q70E73 1250 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 VPS11Q9H270 941 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ARL2BPQ9Y2Y0 163 aa18.56■□□□□ 0.56
TRAF3IP1-201ENST00000373327 CIB2O75838 187 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MYL3P08590 195 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ESRRAP11474 423 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ABCD1P33897 745 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 DENND1BQ6P3S1 775 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 MREGQ8N565 214 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 FBXO36Q8NEA4 188 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 BTNL10A8MVZ5 291 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SLC4A1P02730 911 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 STAG3L1P0CL83 205 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 NCKAP1LP55160 1127 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ZACNQ401N2 412 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 AFG1LQ8WV93 481 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ATP2A3Q93084 1043 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 RAB3IPQ96QF0 476 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 KLC2Q9H0B6 622 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SIK2Q9H0K1 926 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 C12orf65Q9H3J6 166 aaKnown RBP18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SPDYE16A6NNV3 312 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 ADCY3O60266 1144 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 PPFIA2O75334 1257 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TNFRSF8P28908 595 aa18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 SARNPP82979 210 aaKnown RBP18.55■□□□□ 0.56
TRAF3IP1-201ENST00000373327 TFDP3Q5H9I0 405 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms