RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 PIGOQ8TEQ8 1089 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 NRG4Q8WWG1 115 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 ASB2Q96Q27 587 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 ETAA1Q9NY74 926 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 MAPRE3Q9UPY8 281 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRC-202ENST00000367364 WDR17Q8IZU2 1322 aa5.45□□□□□ -1.54
PTPRC-202ENST00000367364 LY6G6EA0A0G2JKS1 128 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 POLRMTO00411 1230 aaKnown RBP5.44□□□□□ -1.54
PTPRC-202ENST00000367364 FGBP02675 491 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 ALPLP05186 524 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 EEFSECP57772 596 aaKnown RBP5.44□□□□□ -1.54
PTPRC-202ENST00000367364 CYP4F2P78329 520 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 RBM20Q5T481 1227 aaKnown RBP5.44□□□□□ -1.54
PTPRC-202ENST00000367364 MRPL10Q7Z7H8 261 aaKnown RBP5.44□□□□□ -1.54
PTPRC-202ENST00000367364 COQ8BQ96D53 544 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 RITA1Q96K30 269 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 SLC2A13Q96QE2 648 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 VPS33BQ9H267 617 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 PIF1Q9H611 641 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 MRPS18AQ9NVS2 196 aaKnown RBP5.44□□□□□ -1.54
PTPRC-202ENST00000367364 KLHL13Q9P2N7 655 aa5.44□□□□□ -1.54
PTPRC-202ENST00000367364 VPS53Q5VIR6 699 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 TAF2Q6P1X5 1199 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 SHC4Q6S5L8 630 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 USP43Q70EL4 1123 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 FAM136AQ96C01 138 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 C14orf119Q9NWQ9 140 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 ZNF112Q9UJU3 913 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
PTPRC-202ENST00000367364 ERVV-2B6SEH9 535 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 CYP2C18P33260 490 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 WASP42768 502 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 ERV3-1Q14264 604 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 TWIST1Q15672 202 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 TRIM71Q2Q1W2 868 aaKnown RBP5.42□□□□□ -1.54
PTPRC-202ENST00000367364 CCDC144BQ3MJ40 725 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 PCID2Q5JVF3 399 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 ZNF618Q5T7W0 954 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 MIS18BP1Q6P0N0 1132 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 NAPRTQ6XQN6 538 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 STRA8Q7Z7C7 330 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 RNF180Q86T96 592 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 RSPH3Q86UC2 560 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 C16orf52Q8NHV5 167 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 TDP1Q9NUW8 608 aa5.42□□□□□ -1.54
PTPRC-202ENST00000367364 QSOX1O00391 747 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 MYCLP1P12525 358 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-202ENST00000367364 ATP5F1P24539 256 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-202ENST00000367364 ALDH9A1P49189 494 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 HOXA4Q00056 320 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-202ENST00000367364 CDC42EP1Q00587 391 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 STRN3Q13033 797 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 WDR53Q7Z5U6 358 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-202ENST00000367364 PSD4Q8NDX1 1056 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 KRTAP4-4Q9BYR3 166 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 TTC3P53804 2025 aa5.41□□□□□ -1.54
PTPRC-202ENST00000367364 TCF20Q9UGU0 1960 aaKnown RBP5.4□□□□□ -1.54
PTPRC-202ENST00000367364 PPM1DO15297 605 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 CDC45O75419 566 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 OAZ2O95190 189 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 ANXA1P04083 346 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 KRT10P13645 584 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 PRF1P14222 555 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 SCP2P22307 547 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 CD6P30203 668 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 LIPAP38571 399 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 HTR6P50406 440 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 LEXMQ3ZCV2 418 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 TEDDM1Q5T9Z0 273 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 Q6ZTC4 211 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 DUSP22Q9NRW4 184 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 GPR45Q9Y5Y3 372 aa5.4□□□□□ -1.54
PTPRC-202ENST00000367364 FCHO1O14526 889 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 HYAL1Q12794 435 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 C9orf47Q6ZRZ4 202 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 KIAA0907Q7Z7F0 614 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-202ENST00000367364 SCAMP4Q969E2 229 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 LYZL4Q96KX0 146 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 MRGPRX4Q96LA9 322 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 TINAGL1Q9GZM7 467 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-202ENST00000367364 ZNF277Q9NRM2 450 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-202ENST00000367364 PROCRQ9UNN8 238 aa5.39□□□□□ -1.55
PTPRC-202ENST00000367364 CD8B2A6NJW9 211 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 GTPBP1O00178 669 aaKnown RBP5.38□□□□□ -1.55
PTPRC-202ENST00000367364 ADAM10O14672 748 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 ENGP17813 658 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 CHRM3P20309 590 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 TOB1P50616 345 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-202ENST00000367364 CLCN2P51788 898 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 TLE1Q04724 770 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 RBMS2Q15434 407 aaKnown RBP5.38□□□□□ -1.55
PTPRC-202ENST00000367364 TRIM72Q6ZMU5 477 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 DDX46Q7L014 1031 aaKnown RBP5.38□□□□□ -1.55
PTPRC-202ENST00000367364 AOPEPQ8N6M6 819 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms