RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KCNN4O15554 427 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 NCF2P19878 526 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 RGS7P49802 495 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 PEX5P50542 639 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ALDH18A1P54886 795 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 GCNT1Q02742 428 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 LRRC36Q1X8D7 754 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 SPOCD1Q6ZMY3 1216 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 CYP4X1Q8N118 509 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ZNF606Q8WXB4 792 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 LPAR1Q92633 364 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 TSC22D3Q99576 134 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 MANSC1Q9H8J5 431 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 CYP4F11Q9HBI6 524 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 PXMP2Q9NR77 195 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 COL20A1Q9P218 1284 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ASTN2O75129 1339 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 E2F8A0AVK6 867 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 DNALI1O14645 258 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 MYCNP04198 464 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 PGM1P36871 562 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 BCAR1P56945 870 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 MYL6P60660 151 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 PIGHQ14442 188 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 CRYMQ14894 314 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 MTFR1Q15390 333 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 LACTB2Q53H82 288 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 TFDP3Q5H9I0 405 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 FAM182AQ5T1J6 154 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 C1orf146Q5VVC0 180 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 CRLF3Q8IUI8 442 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 NUDCD3Q8IVD9 361 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ZC3H3Q8IXZ2 948 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 HELQQ8TDG4 1101 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 PSPC1Q8WXF1 523 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 ACAP3Q96P50 834 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ZNF317Q96PQ6 595 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 MRPL4Q9BYD3 311 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 MIS12Q9H081 205 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 C5orf60A6NFR6 353 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 H3BRJ5 948 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 GARTP22102 1010 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 RAP1GAPP47736 663 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 FASTKD3Q14CZ7 662 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 RCN1Q15293 331 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ANKRD20A2Q5SQ80 823 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ANKRD20A1Q5TYW2 823 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ANO5Q75V66 913 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 AGR3Q8TD06 166 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 DNAJC9Q8WXX5 260 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 KLC2Q9H0B6 622 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 C12orf65Q9H3J6 166 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 ACAD9Q9H845 621 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 IFT122Q9HBG6 1241 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 SMYD2Q9NRG4 433 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 FZD1Q9UP38 647 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 GLI3P10071 1580 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 DOT1LQ8TEK3 1739 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 TOGARAM1Q9Y4F4 1720 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 CCDC22O60826 627 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ZWINTO95229 277 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ABCD1P33897 745 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 STAT5BP51692 787 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ZNF200P98182 395 aaPredicted RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 MAMLD1Q13495 774 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 PSMD6Q15008 389 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ATG16L1Q676U5 607 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 NXNQ6DKJ4 435 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 CHADLQ6NUI6 762 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ARID3BQ8IVW6 561 aaPredicted RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 PPIL6Q8IXY8 311 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 UBA3Q8TBC4 463 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 PLEKHO2Q8TD55 490 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 TCP10LQ8TDR4 215 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ATXN7L3BQ96GX2 97 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 NIF3L1Q9GZT8 377 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 KIAA1683Q9H0B3 1180 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 BATF3Q9NR55 127 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 PCMTD2Q9NV79 361 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ASNSD1Q9NWL6 643 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 MCM8Q9UJA3 840 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 A0A1W2PPM1 405 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 SPECC1L-ADORA2AF8WAN1 911 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 PRKCBP05771 671 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 TFDP2Q14188 446 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 TDRD10Q5VZ19 366 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 AP1ARQ63HQ0 302 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 BSNDQ8WZ55 320 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 BORCS6Q96GS4 357 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 NAF1Q96HR8 494 aaKnown RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 SHCBP1LQ9BZQ2 653 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 FOXP3Q9BZS1 431 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 TRIM4Q9C037 500 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 GPR88Q9GZN0 384 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms