RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ROR1Q01973 937 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 COL19A1Q14993 1142 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
FDPS-201ENST00000356657 TMEM184AQ6ZMB5 413 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 FUBP3Q96I24 572 aaKnown RBP eCLIP17.07■□□□□ 0.32
FDPS-201ENST00000356657 NT5C1AQ9BXI3 368 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 AFF4Q9UHB7 1163 aaKnown RBP17.07■□□□□ 0.32
FDPS-201ENST00000356657 A8MXQ7 604 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 CLASP2O75122 1294 aaKnown RBP17.06■□□□□ 0.32
FDPS-201ENST00000356657 CILPO75339 1184 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 ABLIM3O94929 683 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 CSPG5O95196 566 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 ATF2P15336 505 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 NRIP1P48552 1158 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 CLCN4P51793 760 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 UBASH3AP57075 661 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 C4orf50Q6ZRC1 276 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 RNF214Q8ND24 703 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 CASP10Q92851 521 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 TATDN2Q93075 761 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 RTP3Q9BQQ7 232 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
FDPS-201ENST00000356657 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 CISHQ9NSE2 258 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 PLXNA3P51805 1871 aa17.06■□□□□ 0.32
FDPS-201ENST00000356657 WEE2P0C1S8 567 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SLC9A1P19634 815 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 PHLDB3Q6NSJ2 640 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 LILRA6Q6PI73 481 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 CCDC149Q6ZUS6 474 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 ADGRD2Q7Z7M1 963 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 CRYBG2Q8N1P7 616 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 OR10T2Q8NGX3 314 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SPPL2BQ8TCT7 592 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 KIAA1257Q9ULG3 409 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 PCDHGC5Q9Y5F6 944 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 PTPRDP23468 1912 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 WDR27A2RRH5 827 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 LRRN2O75325 713 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 RPL17P18621 184 aaKnown RBP17.05■□□□□ 0.32
FDPS-201ENST00000356657 HOXA9P31269 272 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 NDST1P52848 882 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 HYAL1Q12794 435 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 LRMPQ12912 555 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 KCNC3Q14003 757 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 NR1I3Q14994 352 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 CFAP221Q4G0U5 840 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 LIN9Q5TKA1 542 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 FAM171BQ6P995 826 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.05■□□□□ 0.32
FDPS-201ENST00000356657 TCEAL8Q8IYN2 117 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 B3GALNT2Q8NCR0 500 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 NEK11Q8NG66 645 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SLC22A17Q8WUG5 538 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 PABPC5Q96DU9 382 aaKnown RBP17.05■□□□□ 0.32
FDPS-201ENST00000356657 CEP295NLQ96MC4 621 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 SDCBP2Q9H190 292 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 UBE2TQ9NPD8 197 aaPredicted RBP17.05■□□□□ 0.32
FDPS-201ENST00000356657 CNTN6Q9UQ52 1028 aa17.05■□□□□ 0.32
FDPS-201ENST00000356657 ATP8B3O60423 1300 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 TGM5O43548 720 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 PAEPP09466 180 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 UCHL3P15374 230 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
FDPS-201ENST00000356657 CD58P19256 250 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 ELF1P32519 619 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 CDH8P55286 799 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 SYCP1Q15431 976 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 RSPO2Q6UXX9 243 aaPredicted RBP17.04■□□□□ 0.32
FDPS-201ENST00000356657 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 RBM23Q86U06 439 aaKnown RBP17.04■□□□□ 0.32
FDPS-201ENST00000356657 UBR7Q8N806 425 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 ARID3AQ99856 593 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
FDPS-201ENST00000356657 RHOBTB2Q9BYZ6 727 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 SIX2Q9NPC8 291 aa17.04■□□□□ 0.32
FDPS-201ENST00000356657 PAPLNO95428 1278 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 POU2F2P09086 479 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 PTPN1P18031 435 aaKnown RBP17.03■□□□□ 0.32
FDPS-201ENST00000356657 LMO2P25791 158 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 TUFMP49411 452 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms