RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 AARSP49588 968 aaKnown RBP eCLIP14.76□□□□□ -0.054e-6■■■□□ 17.5
SREBF1-202ENST00000355815 TMED10P49755 219 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ATG16L1Q676U5 607 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 SLFN12LQ6IEE8 588 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 C1orf228Q6PIY5 440 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 DPP9Q86TI2 863 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 TRIM42Q8IWZ5 723 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 GRAMD1AQ96CP6 724 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ACAP3Q96P50 834 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ABCC6O95255 1503 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 TCRBV7S2A1N4TA0A589 114 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 PABPN1LA6NDY0 278 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 KRT37O76014 449 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 HSPA4LO95757 839 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CACNA2D1P54289 1103 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 ACBD5Q5T8D3 534 aaPredicted RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 SPATA33Q96N06 139 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TRIM33Q9UPN9 1127 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 PCDHB2Q9Y5E7 798 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 DUOX1Q9NRD9 1551 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 MGEA5O60502 916 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TTC4O95801 387 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CCNHP51946 323 aaPredicted RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TSPY1Q01534 308 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 HIC1Q14526 733 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 LVRNQ6Q4G3 990 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 EMC1Q8N766 993 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TRIM11Q96F44 468 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 FAM129AQ9BZQ8 928 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TMEM165Q9HC07 324 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CHST7Q9NS84 486 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CHCHD3Q9NX63 227 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 ARHGAP26Q9UNA1 814 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 PFASO15067 1338 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 UBE4BO95155 1302 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 MMP14P50281 582 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CCDC92Q53HC0 331 aaPredicted RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 FAM47CQ5HY64 1035 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 IYDQ6PHW0 289 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 LENG9Q96B70 501 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 SNF8Q96H20 258 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 DDX50Q9BQ39 737 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TSSK1BQ9BXA7 367 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 PXMP2Q9NR77 195 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 DIS3Q9Y2L1 958 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CBX6O95503 412 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 FECHP22830 423 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 NLRP11P59045 1033 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
SREBF1-202ENST00000355815 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 TEX9Q8N6V9 391 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 UBA3Q8TBC4 463 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 CAVIN3Q969G5 261 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 C2CD2Q9Y426 696 aa14.75□□□□□ -0.05
SREBF1-202ENST00000355815 FRMPD4Q14CM0 1322 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 TJP3O95049 919 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ARL4CP56559 192 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 TMC3Q7Z5M5 1100 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 OR6B3Q8NGW1 331 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ATL2Q8NHH9 583 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 EFHD1Q9BUP0 239 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 SAE1Q9UBE0 346 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-202ENST00000355815 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ACAD10Q6JQN1 1059 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 EPS8L1Q8TE68 723 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 SEMA4DQ92854 862 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 FAF2Q96CS3 445 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 HEY2Q9UBP5 337 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 CTNNAL1Q9UBT7 734 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 GTF3C4Q9UKN8 822 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 SPEF2Q9C093 1822 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 M0QYV0 167 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 EPHB2P29323 1055 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 DUOXA2Q1HG44 320 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 HABP4Q5JVS0 413 aaKnown RBP14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ASCC2Q9H1I8 757 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ETAA1Q9NY74 926 aa14.74□□□□□ -0.05
SREBF1-202ENST00000355815 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-202ENST00000355815 NEMP1O14524 444 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 SH3BP5O60239 455 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 KDM1AO60341 852 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 HOXD13P35453 343 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 CLCN3P51790 818 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 NBPF20Q3BBV1 942 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 FAXCQ5TGI0 409 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 CCDC60Q8IWA6 550 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-202ENST00000355815 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 RPS6KC1Q96S38 1066 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 UVRAGQ9P2Y5 699 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 GNGT2O14610 69 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 EGFRP00533 1210 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 ZSCAN5DPP0CG00 497 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 OCRLQ01968 901 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms