RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 ERVK-5Q9HDB9 667 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 KPNA6O60684 536 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 PYGMP11217 842 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 ATF7P17544 494 aaPredicted RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 PSMC1P62191 440 aaKnown RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 CDC42EP1Q00587 391 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 TXNRD3NBQ6F5E7 133 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 OR6B3Q8NGW1 331 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 DEFB118Q96PH6 123 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 FAM118BQ9BPY3 351 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 HERPUD2Q9BSE4 406 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 PRLRP16471 622 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 CLCNKBP51801 687 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 IFI16Q16666 785 aaKnown RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 CFAP221Q4G0U5 840 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 ANKS1BQ7Z6G8 1248 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 PCSK9Q8NBP7 692 aaKnown RBP9.07□□□□□ -0.96
TRIO-201ENST00000344135 STARD7Q9NQZ5 370 aa9.07□□□□□ -0.96
TRIO-201ENST00000344135 ARL5CA6NH57 179 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 F8VP50 259 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 M0QYV0 167 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 MICAL2O94851 1124 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 CKBP12277 381 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 CCDC130P13994 396 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 PAFAH1B1P43034 410 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 SSR1P43307 286 aaKnown RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 ZNF252P-AS1Q0IIN9 211 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 TAF5Q15542 800 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 RSPH3Q86UC2 560 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 BEST2Q8NFU1 509 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 RNPC3Q96LT9 517 aaKnown RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 TSPAN16Q9UKR8 245 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 L1RE1Q9UN81 338 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 TTC3P53804 2025 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 TLR3O15455 904 aaKnown RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 B4GALT3O60512 393 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 GLI1P08151 1106 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 TAS2R40P59535 323 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 LILRA4P59901 499 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 ZNF677Q86XU0 584 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 USP38Q8NB14 1042 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 JOSD2Q8TAC2 188 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 KBTBD7Q8WVZ9 684 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 B3GNT5Q9BYG0 378 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 PLEKHA5Q9HAU0 1116 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 BARX2Q9UMQ3 279 aaPredicted RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 KPNA7A9QM74 516 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 SASH3O75995 380 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 ERBB2P04626 1255 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 ITGB1P05556 798 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 CST5P28325 142 aaPredicted RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 MYO1EQ12965 1108 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 PAK2Q13177 524 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 TRIM71Q2Q1W2 868 aaKnown RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 RTN4RL1Q86UN2 441 aaPredicted RBP9.06□□□□□ -0.96
TRIO-201ENST00000344135 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 FAM81BQ96LP2 452 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 CFHR5Q9BXR6 569 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
TRIO-201ENST00000344135 MYO1FO00160 1098 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 PIRO00625 290 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 AXLP30530 894 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 PEX5P50542 639 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 SH3PXD2AQ5TCZ1 1133 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 TTC30AQ86WT1 665 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 ERICH1Q86X53 443 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 SYCE1Q8N0S2 351 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 CD101Q93033 1021 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 VRTNQ9H8Y1 702 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 HCSTQ9UBK5 93 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 AMACRQ9UHK6 382 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 UBQLN1Q9UMX0 589 aaKnown RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 A8MXQ7 604 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 PI4K2BG5E9Z4 385 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 CLDN5O00501 218 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 TMEM35BQ8NCS4 154 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 NDRG1Q92597 394 aaKnown RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 NT5C1AQ9BXI3 368 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRIO-201ENST00000344135 KRIT1O00522 736 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 GABBR2O75899 941 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 PFKMP08237 780 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 ADORA2BP29275 332 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 ATICP31939 592 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 GPD2P43304 727 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 NKX3-2P78367 333 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 WSCD1Q658N2 575 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 PMF1Q6P1K2 205 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 OSTM1Q86WC4 334 aa9.05□□□□□ -0.96
TRIO-201ENST00000344135 DDX42Q86XP3 938 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRIO-201ENST00000344135 PHF13Q86YI8 300 aaPredicted RBP9.05□□□□□ -0.96
TRIO-201ENST00000344135 CLEC4CQ8WTT0 213 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms