RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 OR1G1P47890 313 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 CDR1P51861 262 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 NOMO3P69849 1222 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 DSC1Q08554 894 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 MFSD5Q6N075 450 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 TMCO2Q7Z6W1 182 aaPredicted RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 NPAS4Q8IUM7 802 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 COLGALT2Q8IYK4 626 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 CRIPAKQ8N1N5 446 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 TTC39CQ8N584 583 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 C1orf131Q8NDD1 294 aaKnown RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 UROC1Q96N76 676 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 INTUQ9ULD6 942 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.5□□□□□ -0.25
CT55-202ENST00000344129 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
CT55-202ENST00000344129 TTC3P53804 2025 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 MED7O43513 233 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 VDRP11473 427 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 WARSP23381 471 aaKnown RBP13.49□□□□□ -0.25
CT55-202ENST00000344129 CASQ1P31415 396 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
CT55-202ENST00000344129 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
CT55-202ENST00000344129 SGO2Q562F6 1265 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 TRIM72Q6ZMU5 477 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 ZNF653Q96CK0 615 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
CT55-202ENST00000344129 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 M0QYV0 167 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 MICAL2O94851 1124 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 PSMC1P62191 440 aaKnown RBP13.48□□□□□ -0.25
CT55-202ENST00000344129 GPC5P78333 572 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 CENPCQ03188 943 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 GOLGA7BQ2TAP0 167 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 FAM117BQ6P1L5 589 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 UBA3Q8TBC4 463 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 FAM124BQ9H5Z6 455 aaPredicted RBP13.48□□□□□ -0.25
CT55-202ENST00000344129 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 OSGEPQ9NPF4 335 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
CT55-202ENST00000344129 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 NCANO14594 1321 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 ATP8B3O60423 1300 aa13.48□□□□□ -0.25
CT55-202ENST00000344129 BTNL10A8MVZ5 291 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 O00370 1275 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 HOXA2O43364 376 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 ATP2C2O75185 946 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 ODC1P11926 461 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
CT55-202ENST00000344129 DEFB103AP81534 67 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 MCOLN2Q8IZK6 566 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 TMEM35BQ8NCS4 154 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 RSPH1Q8WYR4 309 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CYTH4Q9UIA0 394 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 TSPAN16Q9UKR8 245 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 COG5Q9UP83 839 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 ENC1O14682 589 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 PALMO75781 387 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 LSM8O95777 96 aaKnown RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 TUBB4AP04350 444 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CCDC130P13994 396 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 PBX3P40426 434 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 BCAR1P56945 870 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CNGA2Q16280 664 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 PTPROQ16827 1216 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 FAM43BQ6ZT52 329 aaPredicted RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 RNF10Q8N5U6 811 aaKnown RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 RFFLQ8WZ73 363 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 BADQ92934 168 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CTTNBP2NLQ9P2B4 639 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CNOT8Q9UFF9 292 aaKnown RBP13.47□□□□□ -0.25
CT55-202ENST00000344129 PRKAG2Q9UGJ0 569 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 KIAA1257Q9ULG3 409 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
CT55-202ENST00000344129 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms