RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MOGAT1Q96PD6 335 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 C12orf4Q9NQ89 552 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP2Q9NX02 1062 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FAM237AA0A1B0GTK4 181 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KIAA0355O15063 1070 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ORC4O43929 436 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CAPN15O75808 1086 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 LVRNQ6Q4G3 990 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP10Q86W26 655 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SVOPQ8N4V2 548 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ATP6V1C2Q8NEY4 427 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 UGT2A1Q9Y4X1 527 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CEMIPQ8WUJ3 1361 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ACOX3O15254 700 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ABL1P00519 1130 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 LMOD1P29536 600 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 GJC1P36383 396 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ABL2P42684 1182 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 YARSP54577 528 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 USF2Q15853 346 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 EXOC3L4Q17RC7 722 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 LILRB1Q8NHL6 650 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 BBS2Q9BXC9 721 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STK33Q9BYT3 514 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ST20-MTHFSA0A0A6YYL1 179 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 H2AFYO75367 372 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 HMGCRP04035 888 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PCP11498 1178 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 GARNL3Q5VVW2 1013 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DHRS4L2Q6PKH6 230 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RHPN2Q8IUC4 686 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 HDAC11Q96DB2 347 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FRMD6Q96NE9 622 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 IRX2Q9BZI1 471 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RTL9Q8NET4 1388 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEB3O15480 346 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TEX28O15482 410 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 MYL6BP14649 208 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ACLYP53396 1101 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TPCN2Q8NHX9 752 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TCEANC2Q96MN5 208 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 EFCAB1Q9HAE3 211 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FPGT-TNNI3KV9GXZ4 949 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FANCCQ00597 558 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 HIC1Q14526 733 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 COL23A1Q86Y22 540 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC105Q8IYK2 499 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SECISBP2Q96T21 854 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.92□□□□□ -1.782e-6■■■■□ 25.6
SYNE2-202ENST00000344113 ADGRG1Q9Y653 693 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SRP72O76094 671 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 INHBAP08476 426 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 UGT1A1P22309 533 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TBXAS1P24557 533 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PSME3P61289 254 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FAM45AQ8TCE6 357 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STON2Q8WXE9 905 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 L3MBTL3Q96JM7 780 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 OXCT2Q9BYC2 517 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CCSER1Q9C0I3 900 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 USTQ9Y2C2 406 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STMND1H3BQB6 276 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RGS10O43665 173 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RGS9BPQ6ZS82 235 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PEX26Q7Z412 305 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RPS6KC1Q96S38 1066 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CHEK2O96017 543 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 IL6P05231 212 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CPA1P15085 419 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NFIAQ12857 509 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KDM1BQ8NB78 822 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 POU2F1P14859 743 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CSNK2BP67870 215 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 LPCAT2Q7L5N7 544 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SMYD4Q8IYR2 804 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 AMACRQ9UHK6 382 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RAB26Q9ULW5 256 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SIN3BO75182 1162 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DDNO94850 711 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NCF2P19878 526 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SLC9A3P48764 834 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 COTL1Q14019 142 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM50Q86XT4 487 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CHCHD6Q9BRQ6 235 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CUEDC2Q9H467 287 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 WDR19Q8NEZ3 1342 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NUDT17P0C025 328 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RRM2P31350 389 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CD79BP40259 229 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DNM2P50570 870 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TMED2Q15363 201 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PROSER3Q2NL68 480 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TEX30Q5JUR7 227 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MICU2Q8IYU8 434 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ATAD1Q8NBU5 361 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ASAP3Q8TDY4 903 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CKAP2Q8WWK9 683 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 THAP9Q9H5L6 903 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms