RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 WDR24Q96S15 920 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 SRPK1Q96SB4 655 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 NMT2O60551 498 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 TXNP10599 105 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 NUP107P57740 925 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 TTLL9Q3SXZ7 439 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 IYDQ6PHW0 289 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 USP27XA6NNY8 438 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 ENTPD3O75355 529 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 GPD1P21695 349 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 STIP1P31948 543 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 CACNB3P54284 484 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 TRIP10Q15642 601 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 NUP93Q8N1F7 819 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 ERP44Q9BS26 406 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 DMAP1Q9NPF5 467 aaPredicted RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 C20orf96Q9NUD7 363 aaPredicted RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 IL1RAPL1Q9NZN1 696 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 TUBE1Q9UJT0 475 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 GH1P01241 217 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SLC2A3P11169 496 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 BOLA3Q53S33 107 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 PTRHD1Q6GMV3 140 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 AP4S1Q9Y587 144 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MTRF1O75570 445 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 CDH24Q86UP0 819 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MICU2Q8IYU8 434 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 ARL4DP49703 201 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
HLCS-201ENST00000336648 FAM83EQ2M2I3 478 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 KIZQ2M2Z5 673 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SNX31Q8N9S9 440 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 SHROOM2Q13796 1616 aa13.63□□□□□ -0.23
HLCS-201ENST00000336648 B2RBV5 119 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 VHLP40337 213 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 PSMC6P62333 389 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 TRIM25Q14258 630 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 ARMCX4Q5H9R4 360 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 APBB2Q92870 758 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 ATXN7L3BQ96GX2 97 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 ANKEF1Q9NU02 776 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 XPO1O14980 1071 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 MAPK1P28482 360 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 CAPZA2P47755 286 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 GEMIN4P57678 1058 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 DMPKQ09013 629 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 SLC7A14Q8TBB6 771 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 AGR3Q8TD06 166 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 HIC2Q96JB3 615 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 MCEEQ96PE7 176 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 C17orf80Q9BSJ5 609 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 EXTL3O43909 919 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 ALBP02768 609 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 CAPN1P07384 714 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 LONRF1Q17RB8 773 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 TRIM65Q6PJ69 517 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 TMEM117Q9H0C3 514 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 TADA2AO75478 443 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 PRKCQQ04759 706 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 KPNB1Q14974 876 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 CPVLQ9H3G5 476 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 AKR1B1P15121 316 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 LSP1P33241 339 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 NCALDP61601 193 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 LRRC74AQ0VAA2 488 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 DIS3LQ8TF46 1054 aaKnown RBP13.62□□□□□ -0.23
HLCS-201ENST00000336648 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
HLCS-201ENST00000336648 EPS8L2Q9H6S3 715 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms