RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 A0A0G2JND7 137 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 MYBL1P10243 752 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 LSP1P33241 339 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
SYNM-201ENST00000328642 GTF2A2P52657 109 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 OAZ1P54368 228 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 IL9RQ01113 521 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 CELF3Q5SZQ8 465 aaKnown RBP16.86■□□□□ 0.29
SYNM-201ENST00000328642 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 AGR3Q8TD06 166 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 ACTRT1Q8TDG2 376 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 SCYL1Q96KG9 808 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 CALR3Q96L12 384 aaKnown RBP16.86■□□□□ 0.29
SYNM-201ENST00000328642 CCT8L2Q96SF2 557 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
SYNM-201ENST00000328642 ATP9BO43861 1147 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 ARIH2O95376 493 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 THPOP40225 353 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 ARL4CP56559 192 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 PTPN11Q06124 597 aaPredicted RBP16.86■□□□□ 0.29
SYNM-201ENST00000328642 PID1Q7Z2X4 250 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 TMEM130Q8N3G9 435 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYNM-201ENST00000328642 ACTL9Q8TC94 416 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 PLEKHO2Q8TD55 490 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 SHC3Q92529 594 aa16.86■□□□□ 0.29
SYNM-201ENST00000328642 I3L4J1 428 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 ACO1P21399 889 aaKnown RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 GBP1P32455 592 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 TFDP2Q14188 446 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 PSMD6Q15008 389 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 PCGF5Q86SE9 256 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 A6NNZ2 444 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 ACKR2O00590 384 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 MDH1P40925 334 aaKnown RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 SARNPP82979 210 aaKnown RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 ROR1Q01973 937 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 HIF1AQ16665 826 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 C15orf59Q2T9L4 293 aaPredicted RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 TUBB8Q3ZCM7 444 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 FAM71AQ8IYT1 594 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 MCUQ8NE86 351 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 KNL1Q8NG31 2342 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 RNF139Q8WU17 664 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 PITPNM3Q9BZ71 974 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 GOLGA2P5Q9HBQ8 144 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 NUDT5Q9UKK9 219 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 TCP11X1B4DZS4 312 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 ASAP2O43150 1006 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 POMCP01189 267 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 RFC1P35251 1148 aaPredicted RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 OTUD4Q01804 1114 aaKnown RBP16.85■□□□□ 0.29
SYNM-201ENST00000328642 C4orf50Q6ZRC1 276 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 RXFP2Q8WXD0 754 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 SIX2Q9NPC8 291 aa16.85■□□□□ 0.29
SYNM-201ENST00000328642 FOXO6A8MYZ6 492 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 CFHP08603 1231 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 GNAT1P11488 350 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 ANXA13P27216 316 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 SLC1A1P43005 524 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 ZACNQ401N2 412 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 TMEM192Q8IY95 271 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 VPS52Q8N1B4 723 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 CDT1Q9H211 546 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 LRFN2Q9ULH4 789 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 PROSCO94903 275 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 IFI35P80217 286 aaPredicted RBP16.84■□□□□ 0.29
SYNM-201ENST00000328642 CEP128Q6ZU80 1094 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 TSPAN16Q9UKR8 245 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 KIAA0391O15091 583 aaKnown RBP16.84■□□□□ 0.29
SYNM-201ENST00000328642 AP3M2P53677 418 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 ACVR2BQ13705 512 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 HEATR6Q6AI08 1181 aaKnown RBP16.84■□□□□ 0.29
SYNM-201ENST00000328642 MCUR1Q96AQ8 359 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
SYNM-201ENST00000328642 SUN1O94901 812 aa16.83■□□□□ 0.29
SYNM-201ENST00000328642 MMP14P50281 582 aa16.83■□□□□ 0.29
SYNM-201ENST00000328642 NCKAP1LP55160 1127 aa16.83■□□□□ 0.29
SYNM-201ENST00000328642 RCOR2Q8IZ40 523 aa16.83■□□□□ 0.29
SYNM-201ENST00000328642 CCDC97Q96F63 343 aaPredicted RBP16.83■□□□□ 0.29
SYNM-201ENST00000328642 DNPEPQ9ULA0 475 aa16.83■□□□□ 0.29
SYNM-201ENST00000328642 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 MAGEA4P43358 317 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 COBLL1Q53SF7 1204 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 NOTUMQ6P988 496 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 C3orf62Q6ZUJ4 267 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 SAMD3Q8N6K7 520 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 BHMTQ93088 406 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 CDC42EP4Q9H3Q1 356 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms