RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 DENND1BQ6P3S1 775 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 ANKS1BQ7Z6G8 1248 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 NIPA2Q8N8Q9 360 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 C2orf69Q8N8R5 385 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 RBM41Q96IZ5 413 aaKnown RBP20.18■□□□□ 0.82
CD55-201ENST00000314754 SDCBP2Q9H190 292 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 SMYD3Q9H7B4 428 aa20.18■□□□□ 0.82
CD55-201ENST00000314754 R3HDM2Q9Y2K5 976 aaKnown RBP20.18■□□□□ 0.82
CD55-201ENST00000314754 TCF4P15884 667 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ATP1A2P50993 1020 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 CDH8P55286 799 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 SLC20A2Q08357 652 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 DENND2CQ68D51 928 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 RCOR2Q8IZ40 523 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ATL2Q8NHH9 583 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 SLC15A5A6NIM6 579 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 CILPO75339 1184 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 OGDHQ02218 1023 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 NFX1Q12986 1120 aaKnown RBP20.17■□□□□ 0.82
CD55-201ENST00000314754 KRT71Q3SY84 523 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 PTPN20Q4JDL3 420 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 CYP4A22Q5TCH4 519 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 NT5DC4Q86YG4 428 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 SLC4A11Q8NBS3 891 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 NPLOC4Q8TAT6 608 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 SLC5A4Q9NY91 659 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ASIC3Q9UHC3 531 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ITGA11Q9UKX5 1188 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 ZNF236Q9UL36 1845 aa20.17■□□□□ 0.82
CD55-201ENST00000314754 F8VP50 259 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 ITIH2P19823 946 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
CD55-201ENST00000314754 TTC19Q6DKK2 380 aaPredicted RBP20.16■□□□□ 0.82
CD55-201ENST00000314754 ARFGAP2Q8N6H7 521 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 KLHL11Q9NVR0 708 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 HMGXB4Q9UGU5 601 aa20.16■□□□□ 0.82
CD55-201ENST00000314754 RRN3P2A6NIE6 340 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 ITGBL1O95965 494 aaPredicted RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 RARGP13631 454 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 FGFR4P22455 802 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 UBAP2Q5T6F2 1119 aaKnown RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 HOOK3Q86VS8 718 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 RNF25Q96BH1 459 aaPredicted RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 SNF8Q96H20 258 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 FAM124BQ9H5Z6 455 aaPredicted RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 TP73O15350 636 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 CELF2O95319 508 aaKnown RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 IVDP26440 423 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 GSCP56915 257 aaPredicted RBP20.15■□□□□ 0.82
CD55-201ENST00000314754 PDCLQ13371 301 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 TMEM176AQ96HP8 235 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 CCDC114Q96M63 670 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 SLITRK1Q96PX8 696 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 TWNKQ96RR1 684 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 FAM118BQ9BPY3 351 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 SEMA4AQ9H3S1 761 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 TJP2Q9UDY2 1190 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 CYTH4Q9UIA0 394 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 AGAP1Q9UPQ3 857 aa20.15■□□□□ 0.82
CD55-201ENST00000314754 SIGLEC16A6NMB1 481 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 STAU1O95793 577 aaKnown RBP20.14■□□□□ 0.81
CD55-201ENST00000314754 KRT1P04264 644 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 GRM5P41594 1212 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 COPS2P61201 443 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 DCAF4L1Q3SXM0 396 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 ATP13A4Q4VNC1 1196 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 SETD4Q9NVD3 440 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 WDR35Q9P2L0 1181 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 TRIP12Q14669 1992 aaPredicted RBP20.14■□□□□ 0.81
CD55-201ENST00000314754 HPDP32754 393 aaPredicted RBP20.14■□□□□ 0.81
CD55-201ENST00000314754 RBP5P82980 135 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 PDE4CQ08493 712 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 ZFYVE27Q5T4F4 411 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 FOXR1Q6PIV2 292 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 FNIP1Q8TF40 1166 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 DPP3Q9NY33 737 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 DDX56Q9NY93 547 aaKnown RBP20.14■□□□□ 0.81
CD55-201ENST00000314754 NEU2Q9Y3R4 380 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 SCN1AP35498 2009 aa20.14■□□□□ 0.81
CD55-201ENST00000314754 A6NJR5 290 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 TJP3O95049 919 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 SHBGP04278 402 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 KRT3P12035 628 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 PTPN7P35236 360 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 CDC42EP1Q00587 391 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 INCA1Q0VD86 236 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 IRF5Q13568 498 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 SLC29A2Q14542 456 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 KIZQ2M2Z5 673 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 RHBDF2Q6PJF5 856 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 APBB1IPQ7Z5R6 666 aaPredicted RBP20.13■□□□□ 0.81
CD55-201ENST00000314754 TTC39CQ8N584 583 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 CPXM1Q96SM3 734 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 TSPYL1Q9H0U9 437 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 CXCL16Q9H2A7 254 aa20.13■□□□□ 0.81
CD55-201ENST00000314754 ADAMTS10Q9H324 1103 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms