RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TSSK1BQ9BXA7 367 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ZNF212Q9UDV6 495 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 APOA4P06727 396 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 GPD1P21695 349 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 FGFR2P21802 821 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TGFB2P61812 414 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 IGDCC4Q8TDY8 1250 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 EMID1Q96A84 441 aaPredicted RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 C9orf72Q96LT7 481 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 DONSONQ9NYP3 566 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TADA3O75528 432 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 PYGLP06737 847 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 THP07101 528 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 KDSRQ06136 332 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SPARCL1Q14515 664 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 MFSD10Q14728 455 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TRMT11Q7Z4G4 463 aaKnown RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 C17orf80Q9BSJ5 609 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 LGALS16A8MUM7 142 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 RTN2O75298 545 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ERVK-10P10266 1014 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 GLRBP48167 497 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ALDH9A1P49189 494 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SLC39A12Q504Y0 691 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ATP6V0D2Q8N8Y2 350 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 C1orf167Q5SNV9 1468 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ARHGEF12Q9NZN5 1544 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ADCY3O60266 1144 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 MED24O75448 989 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ENO3P13929 434 aaPredicted RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TPH1P17752 444 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SLC11A2P49281 568 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 POLE2P56282 527 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ACVR2BQ13705 512 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 PDXDC1Q6P996 788 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 ICA1LQ8NDH6 482 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 CCDC124Q96CT7 223 aaKnown RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 CYFIP2Q96F07 1278 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SLC38A7Q9NVC3 462 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 NYAP2Q9P242 653 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 FBXO2Q9UK22 296 aaPredicted RBP8.15□□□□□ -1.1
SCN9A-201ENST00000303354 PRKAB1Q9Y478 270 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 RRN3P2A6NIE6 340 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GYG2O15488 501 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 NDUFV1P49821 464 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 DMC1Q14565 340 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GRIK4Q16099 956 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 TLK2Q86UE8 772 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 TTC13Q8NBP0 860 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 PRMT1Q99873 361 aaKnown RBP8.15□□□□□ -1.11
SCN9A-201ENST00000303354 CORO1BQ9BR76 489 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 ARHGAP26Q9UNA1 814 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 RNF103-CHMP3A0A140T963 221 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 AMHP03971 560 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 TMED1Q13445 227 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 POLD3Q15054 466 aaPredicted RBP8.15□□□□□ -1.11
SCN9A-201ENST00000303354 SNCBQ16143 134 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 TRIML2Q8N7C3 387 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 TRBV23OR9-2A0A075B6M9 112 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GOLGA8QA0A0J9YX86 632 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GOLGA8OA6NCC3 632 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GOLGA8NF8WBI6 632 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 MAGEB2O15479 319 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 BRAFP15056 766 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 VGLL4Q14135 290 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.15□□□□□ -1.11
SCN9A-201ENST00000303354 EMC1Q8N766 993 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 NETO2Q8NC67 525 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 OSBPL9Q96SU4 736 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 CATSPERBQ9H7T0 1116 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 DDX56Q9NY93 547 aaKnown RBP8.15□□□□□ -1.11
SCN9A-201ENST00000303354 ZFP69BQ9UJL9 534 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 CHD1O14646 1710 aa8.15□□□□□ -1.11
SCN9A-201ENST00000303354 GJB1P08034 283 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 ABCB1P08183 1280 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-201ENST00000303354 IL1R1P14778 569 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 NR1D1P20393 614 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 MROH9Q5TGP6 573 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 PTAR1Q7Z6K3 402 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-201ENST00000303354 FBXO33Q7Z6M2 555 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 PPP1R14AQ96A00 147 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 PHF20Q9BVI0 1012 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 EXO5Q9H790 373 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 ZFATQ9P243 1243 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 ZMYND8Q9ULU4 1186 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-201ENST00000303354 ORC4O43929 436 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 NDUFS2O75306 463 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 RHOCP08134 193 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 PDHA1P08559 390 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 STK4Q13043 487 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 ADGRA1Q86SQ6 560 aa8.14□□□□□ -1.11
SCN9A-201ENST00000303354 UPF3AQ9H1J1 476 aaKnown RBP8.14□□□□□ -1.11
SCN9A-201ENST00000303354 TLR8Q9NR97 1041 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms