RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 RHOP08100 348 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 FSHRP23945 695 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 STX17P56962 302 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 MYL7Q01449 175 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 SMARCB1Q12824 385 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 ZNF699Q32M78 642 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 INTS6LQ5JSJ4 861 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 FOXR2Q6PJQ5 311 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 OTOP3Q7RTS5 596 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 FILIP1Q7Z7B0 1213 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 DCP1BQ8IZD4 617 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 TDRD5Q8NAT2 981 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 ITFG1Q8TB96 612 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 TAS1R2Q8TE23 839 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 DNAJC25Q9H1X3 360 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 MMRN2Q9H8L6 949 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 HSFX1Q9UBD0 423 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 MUTYHQ9UIF7 546 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 CTNND2Q9UQB3 1225 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 PDCD11Q14690 1871 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 TCF20Q9UGU0 1960 aaKnown RBP9.02□□□□□ -0.96
ERCC8-201ENST00000265038 MYBPHLA2RUH7 354 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ATP2C2O75185 946 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PDGFRBP09619 1106 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PTPN2P17706 415 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 GTF2H1P32780 548 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 CDH8P55286 799 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 TNNC1P63316 161 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 TSPY1Q01534 308 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PAK1Q13153 545 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SLC5A9Q2M3M2 681 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SGSM1Q2NKQ1 1148 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ZNF667Q5HYK9 610 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 POTEHQ6S545 545 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 HS6ST3Q8IZP7 471 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 C2orf15Q8WU43 125 aaKnown RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ACSF2Q96CM8 615 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 CEP63Q96MT8 703 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 MED15Q96RN5 788 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PI4K2AQ9BTU6 479 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SDCBP2Q9H190 292 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 NUP62CLQ9H1M0 184 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 APOBEC3GQ9HC16 384 aaKnown RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 TMEM8AQ9HCN3 771 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 GTF3C4Q9UKN8 822 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ANK1P16157 1881 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PLXNA3P51805 1871 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 BICDL2A1A5D9 508 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ASS1P00966 412 aaKnown RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ASGR2P07307 311 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PCSK1P29120 753 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 GNL1P36915 607 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PIK3CAP42336 1068 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PRSS36Q5K4E3 855 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 KRT39Q6A163 491 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 OR6B3Q8NGW1 331 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 TAF4BQ92750 862 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ZNF512Q96ME7 567 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SEPT5Q99719 369 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 SYT15Q9BQS2 421 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 CORO1BQ9BR76 489 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 LRRC3Q9BY71 257 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 CRTAC1Q9NQ79 661 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 ABI2Q9NYB9 513 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
ERCC8-201ENST00000265038 EPS15L1Q9UBC2 864 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 CDH9Q9ULB4 789 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 PCDHB5Q9Y5E4 795 aa9.02□□□□□ -0.97
ERCC8-201ENST00000265038 DCXO43602 365 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 MOSPD3O75425 235 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 LAMP2P13473 410 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 ATF6P18850 670 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 CCR2P41597 374 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 ASPAP45381 313 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 TUFMP49411 452 aaKnown RBP9.01□□□□□ -0.97
ERCC8-201ENST00000265038 GPR15P49685 360 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 NFE2Q16621 373 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-201ENST00000265038 CBWD6Q4V339 395 aa9.01□□□□□ -0.97
ERCC8-201ENST00000265038 CBWD3Q5JTY5 395 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms